KEGG   Edaphobacter sp. 12200R-103: GWR55_15475
Entry
GWR55_15475       CDS       T06408                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
eda  Edaphobacter sp. 12200R-103
Pathway
eda00521  Streptomycin biosynthesis
eda00523  Polyketide sugar unit biosynthesis
eda00525  Acarbose and validamycin biosynthesis
eda00541  Biosynthesis of various nucleotide sugars
eda01055  Biosynthesis of vancomycin group antibiotics
eda01100  Metabolic pathways
eda01110  Biosynthesis of secondary metabolites
eda01250  Biosynthesis of nucleotide sugars
Module
eda_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:eda00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    GWR55_15475 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    GWR55_15475 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    GWR55_15475 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    GWR55_15475 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    GWR55_15475 (rfbB)
Enzymes [BR:eda01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     GWR55_15475 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 adh_short NAD_binding_10
Other DBs
NCBI-ProteinID: QHS52967
UniProt: A0A6B9YTH8
LinkDB
Position
3724615..3725751
AA seq 378 aa
MSAEQKRKRTPNGSSSPILVTGGAGFIGSNFVLEWFAAGNGPVINLDKLTYAGNPENLAS
IANLPGYTFVRGDICDAEMLKNLLERYRPRAIVHFAAESHVDRSILGPEAFLRTNIDGTF
TLLRAAKVYLESLDENDRADFRFLHVSTDEVYGTLAPEDPAFHEQTPYAPNSPYAASKAA
SDHLVRAWVHTYNLPAIITNCSNNYGPYQFPEKLIPLMIANARRGKPLPVYGDGQQVRDW
LYVADHCRALMSVLERGRIGETYNVGGCNQRTNLEVVTTLCTLLDELLPESEFRPHKQLL
TYVADRPGHDRRYAINAEKLQRELDWSPQESFETGLRKTVEWYLANTEWVDRITSGAYQH
WVEQNYGSREAVSARSAQ
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgagcgcagaacagaagcggaagagaacgccgaacggaagttcgagccccatccttgtt
actggaggagctggttttattggctccaacttcgtcctcgaatggtttgcggccggcaat
ggcccggtcatcaatctcgataagctgacctatgcgggtaatccggagaacctggcatcc
atcgccaatctcccaggctatacctttgttcgcggtgacatctgcgacgcggagatgttg
aaaaatctgctggagcgctatcgcccccgcgccatcgttcactttgcggcggaaagtcat
gtcgatcgttcgatcctggggccggaagcctttcttcgcactaatattgatggcaccttc
actttgctgcgtgcggcaaaggtttacctggagtcattggatgaaaacgatcgcgccgac
ttccgttttcttcacgtgtcgaccgatgaggtatacggcacattggcgccggaagacccc
gcctttcatgaacagacgccctacgcgccgaactcgccctatgcagcatcgaaggcggcc
agcgatcaccttgttcgcgcctgggttcacacctacaacctgccggctatcatcaccaac
tgctccaataactatggaccgtatcagtttcccgaaaagctgattcccttaatgatcgcg
aacgctcgcagaggcaaaccccttcctgtgtatggcgacggtcagcaggtacgtgactgg
ttgtatgtggctgatcactgtagggcgctgatgtccgtgcttgaacggggacgcatcggc
gagacgtataacgtcggcggctgtaatcaacggacgaacctggaagtagtaacgacgctc
tgcaccctgctggacgagctgttgccggaatcagagttccgtccccacaagcagcttttg
acttacgtcgcggatcggccaggacatgaccgtcgttatgccatcaatgccgaaaagctg
caacgcgagctggattggagcccccaggagagctttgagacggggctgcgaaagacggtg
gagtggtacctggcgaatacggagtgggtcgatcgcatcaccagcggagcgtatcaacac
tgggtcgagcagaactatggttcgcgcgaggcggtctctgcgaggagtgcgcaatga

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