Edaphobacter sp. 12200R-103: GWR55_15925
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Entry
GWR55_15925 CDS
T06408
Name
(GenBank) substrate-binding domain-containing protein
KO
K10559
rhamnose transport system substrate-binding protein
K10561
rhamnose transport system permease protein
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GWR55_15925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eda02000
]
GWR55_15925
Transporters [BR:
eda02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
GWR55_15925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
Peripla_BP_6
CwsA
DUF3798
Motif
Other DBs
NCBI-ProteinID:
QHS53038
UniProt:
A0A6B9YTD3
LinkDB
All DBs
Position
complement(3821383..3823368)
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AA seq
661 aa
AA seq
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MHTHLRPKFRLSGIQWALLGALLVEIIVFGVSSPAFLTWTNGMEILRFSVELGLLVVALT
PILITGGIDLSVGSTIGLVAVTFGLAWQNLHLSIPAAAALALLVALLCGAVNAALIASLN
LPALIITLGTYSLYRGVAEGVTHAAVSVTGYPESFLRLGQGYLWSVPIQVFVFLLFIAFY
AVLLHWSKVGRGLYAIGLNAEGARYAGLPVRRYLALVYLLSGVVSGVAAIIYVAHLGLAK
SDLGTGFELQAITAIVIGGTSVFGGRGDLFGSVLGLLFLCVLQNGLHLLAQPSEATGVLT
GALLILVVASDLLTERMQAMRQRWARWRRPLLIAGAAGAAVVAIAIAFTLRSSRANAGLA
EHRPVIAVMPKAKGDPYFISARAGAEEAARQLGVDLIWDGPTSLDPSMQNELVESWITRH
VDAIVVAVANKGSISTVLRKARQHHIPVLTWDADAEPDGRDYFLNQATPQAIADTLADEG
ARLLNGKGDFAIITGPLSAENQNEWISFIRQRVAERYPQMKLVTVLPSDDDRDKAFSQTQ
NILKVYPDVKLIIAISAPAVPGAAEAVQQARSKVNVIGLSLPTICRPYIHSGVVQTIVLW
NTRDLGYLTVYAGWLASQGKIPPNATSINAGRLGELDVRGSEIILGKPMLINKANIDKLD
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcacacacacttgcggcctaagttcagactctccgggattcaatgggcgctgctgggt
gcactgctcgttgagatcatcgtcttcggcgtctcctcgcctgcgttcctgacatggacg
aatgggatggagattcttcgcttcagcgtggagcttggacttctggtcgtcgcgctgact
cccatcctgatcaccggcggaattgatctctccgtcggctcaaccatcggactggtagct
gtcaccttcgggctggcgtggcagaaccttcacctttcgattcccgccgcggctgcgctt
gcgctgctggtcgcacttctctgcggagcggtgaacgccgcgctgattgcctccctgaac
cttcctgccctgatcatcactctgggcacatactcgctctatcgcggagtcgcggagggt
gtcacgcatgccgcagtcagtgtgacaggatacccggagagttttttgcggctgggacag
ggatatctgtggagtgtcccgatccaggtgtttgtattcctgctcttcatcgccttttat
gctgttcttctccactggtcgaaggtagggcgcggcctctacgccatcgggctgaacgct
gagggcgcccggtacgccgggcttccggtcaggcgatatctcgcgctggtttacctgctg
tccggagttgtgtccggggtggcggccatcatctatgtcgcgcatcttggacttgcaaag
tcggacctgggcacgggattcgagcttcaggctataacggccattgtgatcggaggaaca
tccgtcttcggcgggcgaggcgatcttttcggcagcgtgcttgggcttctgtttctgtgc
gtgctgcagaatggactgcatctgctggcacagccgtcggaggcaaccggcgttctgacc
ggagcgcttctgatcctggtggtagcgagcgatctgctgaccgagcgaatgcaggccatg
cgacaacgctgggcacggtggcggcgtccgctgctgattgcaggagctgctggcgctgct
gtggttgcgattgcgattgcgttcacgctgcgatcttcgcgggcaaacgcagggttagct
gagcatcgaccggtgatcgcagtgatgcccaaagccaagggcgatccttactttattagc
gcacgtgcgggtgcggaggaggctgcacggcagcttggagtcgacctgatctgggatgga
ccgaccagtctcgatccttccatgcagaacgagctggtcgagagctggatcacgcgacac
gttgacgccatcgtggttgcagtggcgaacaaagggagcatctcgacggtgctgcgcaag
gcacggcagcatcacatcccggtgctgacgtgggatgcggacgcggagccggatgggcgc
gactacttcctgaaccaggccacaccccaggcgattgccgataccctggccgacgaagga
gcgcgcctgctgaacggcaaaggcgattttgccatcatcaccgggccgctaagcgcggag
aatcagaacgagtggatctcatttattcgccagagagtagccgagcgctatccgcagatg
aaactggtaacggtgttgcccagcgacgacgatcgcgacaaggccttctcgcagacacag
aacatcctgaaggtttatcccgacgtgaagctgatcatcgccatctccgctcctgcggtt
cccggagcggccgaggcagtccagcaggccagaagcaaggtgaatgtgatcgggctttcg
ctgccgaccatctgtcgtccctacatccatagcggagtggtacaaacaatcgtgctgtgg
aacacgagggacctcggttatctgactgtctacgccggatggcttgcttcacaagggaag
atacctcccaacgcaacttcgattaacgccgggcgcctgggagagctggatgtgcgcgga
agcgagatcatcctgggcaagccgatgctcatcaacaaggcgaacatcgacaagttggat
ttctag
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