Edaphobacter sp. 12200R-103: GWR55_16700
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Entry
GWR55_16700 CDS
T06408
Name
(GenBank) glycoside hydrolase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00040
Pentose and glucuronate interconversions
eda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GWR55_16700
Enzymes [BR:
eda01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
GWR55_16700
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
QHS53178
UniProt:
A0A6B9YTR7
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Position
4035856..4037319
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AA seq
487 aa
AA seq
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MLVKEVRPMRFRIGLLGIVLAVAGAAGAQDTRRVMEPKIPRACTKLKAELRSVNNSIAEA
DETKLDTERIQKALDRCKPGRAVELTMSRGRDAFLTGPLEMRTGVTLLVDKGVTLFGSRD
AALYEMKGEGAPTHLCGTIATGTLPAVFPAPQHPAPAHGGCRPLIGISNAKDVGIMGDGV
IDGRGYAKILNKDYSWWQLARRAEPKNEHYFNPRMIVASHADGLVLYRITLHNSTNFHVS
VNQTNGFTAWGVHLLTPTVRGTDARNTDGIDPGGSTNITVAHSWIDNGDDNIAIKTGVSH
MSVIDNHFYSGHGMSIGSETYTGQRFVLVDGLTEDHTTSGIRIKSNVTRGGSVHDLTYRN
ICMRDVKNPIAISPYYTNQTTEPFEDPKYKGDRIPDYKAITLQNVTSTTDGDVLIAGLQG
HTTQVTFDNVRVEDISPMQVHGHFATVTLGPGGTNIDFSGTDIKVVSPTAPKQVAPYSCE
GKFVPMQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttggtaaaagaggttagaccaatgaggtttcgtataggcttgcttgggattgttctg
gcggtggcgggtgcagcgggagcccaggatactcgcagagtcatggagccgaagatcccg
cgtgcctgtacaaagctgaaggccgagttgcgctctgtgaacaatagcatcgctgaagcg
gatgagacgaagctggatacggagagaattcagaaggctctggaccgctgcaagccggga
agagccgttgagctgacgatgtcgcgaggacgggatgcgttcctgaccgggccgcttgag
atgcgcacaggcgtgacgctgctggtggacaagggcgtgacgctgttcggctcacgcgat
gccgcgctatacgagatgaagggtgaaggagcgccaacgcatctgtgcggaacgatagcg
acagggacattgcctgcagtgtttcctgctccgcagcaccctgcaccggcgcacggagga
tgccgcccgctgatcggcatcagcaatgcgaaggatgtcggcatcatgggcgatggcgtg
atcgacggtcgcggttacgcgaagatcctgaacaaggactatagctggtggcagctggcc
cgcagggcggagccgaagaacgagcactacttcaatccgcggatgattgtggcctcgcat
gccgatggcctggtgctgtatcggattacgctgcataactcgacgaactttcatgtgagt
gtgaatcagactaatggttttactgcctggggagtgcatctgctgaccccgacagttcgc
gggaccgatgcgcgaaacacggacgggatcgatcctggtggttcgacgaacattacagtt
gcgcacagctggatcgataacggcgacgacaatatcgccatcaagacgggtgtctcgcac
atgagcgtgatcgacaaccacttctactcgggccatgggatgtcgattggaagcgagaca
tatacgggacagaggtttgttctggtcgatggcctgaccgaggaccacacaacgagcggt
atccgtatcaagagcaacgtcactcgaggcggatcggtccacgatctgacgtatcggaac
atctgcatgcgggatgtgaagaacccgattgcgatcagtccttattacacgaaccagacg
acggagccgtttgaagacccgaagtataagggcgaccggattcccgactacaaggcgatc
acactccagaatgtgacgagtacgacggacggcgatgttctaattgctggtctgcagggg
catacgacgcaggtgacgttcgataacgtccgcgtggaggacatctcgcccatgcaggtg
catggccattttgcgacggtgacgctggggccgggtggaaccaatatcgactttagcgga
actgatattaaggtggtgtctcctacggctccgaagcaggttgctccttatagctgcgag
gggaagtttgttcctatgcagtga
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