Edaphobacter sp. 12200R-103: GWR55_17640
Help
Entry
GWR55_17640 CDS
T06408
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00540
Lipopolysaccharide biosynthesis
eda01100
Metabolic pathways
eda01250
Biosynthesis of nucleotide sugars
Module
eda_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GWR55_17640 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
eda01005
]
GWR55_17640 (kdsB)
Enzymes [BR:
eda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
GWR55_17640 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
eda01005
]
Lipid A
GWR55_17640 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
P3A
IspD
Motif
Other DBs
NCBI-ProteinID:
QHS53979
UniProt:
A0A6B9YWJ7
LinkDB
All DBs
Position
complement(4255696..4256478)
Genome browser
AA seq
260 aa
AA seq
DB search
MAQPDSIILDSTLPEKSSESHPLRVVGVIPARLASTRLPRKILRPIAGRPMLAWVWEAAV
ACPQLDQLLVATDSDEIASLCNENGWTCQLTSPALASGTDRVHAVSQIVDADIYVNIQGD
EPLLKPEHLTALLQPFAKPGVDVTTLKVPCTPENIHNPNAVKVVTAEDGRALYFSRATIP
YNRDGNPALYWKHIGLYAYRKAALQRFPALPSSTLEHTERLEQLRFLENGVNLYVEPTPF
DTIGVDTEEDLRLVESVLTR
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
ctggcacagccagattccatcatacttgattccacgctgccggaaaagtccagcgagagc
caccctttgcgggtcgttggcgttatcccggctcgcctcgcctctacccgtctacctcgc
aagattcttcgccccatcgccggccggcccatgctcgcatgggtgtgggaggcagcggtt
gcctgcccccaactcgaccagttgctagtcgccaccgattcggatgagatcgcctccctc
tgcaacgaaaatggctggacctgccagctgacatcgcctgcactcgccagcggaaccgat
cgcgtccacgccgtctcacagatcgtcgacgctgatatctacgtcaatatccagggagat
gaaccgctcctgaagccggagcacctgaccgctctgctgcaaccctttgccaagccaggc
gttgacgtgacgaccctcaaggtgccctgcacccccgagaacatccacaatcccaacgcc
gtaaaggtggtcaccgcggaagacggacgggccctctacttctctcgcgccaccatcccc
tacaaccgcgacgggaatccggccctctattggaagcacatcggcctgtatgcctatcga
aaagccgcgctgcaacggtttcctgcactgccttccagcacgctcgaacacacggagcgt
ctcgaacagcttcgctttctcgaaaacggcgtcaacctttatgtagagccgacgcccttc
gatacgataggggtcgacacggaggaagacctacgcctggtggagtccgtgctgacgcgc
tag
DBGET
integrated database retrieval system
