Edaphobacter sp. 12200R-103: GWR55_17705
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Entry
GWR55_17705 CDS
T06408
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda00300
Lysine biosynthesis
eda00470
D-Amino acid metabolism
eda01100
Metabolic pathways
eda01110
Biosynthesis of secondary metabolites
eda01120
Microbial metabolism in diverse environments
eda01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GWR55_17705 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GWR55_17705 (dapF)
Enzymes [BR:
eda01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GWR55_17705 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QHS53339
UniProt:
A0A6B9YUJ1
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Position
4270055..4270858
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AA seq
267 aa
AA seq
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MIPFVKAHACGNDFLILEEAVAARQHAALARKLCSRNTSIGADGIEFLERRPNGEFFLRL
FNADGSEAELSGNGTRCVAAWLASSEGRDQVVFGTHGGPRSCRVVEDADPLYLVESEMGV
PRVMERTIEIPEIGQVAGAMVNVGNPHFVIFVESEDFSSHGLSWQELGGHISVSSLFPHG
TNVEFVKVLSGGEIAFRIFERGCGPTTSSGTGTCASSAAAMALRGVDRELKAVAEGGAQR
TVWLSSEEVMRLTGPAEIICHGEVFGL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgattccctttgtaaaagcacatgcatgcggtaacgattttctgattctggaggaggcc
gtcgccgcgcggcagcatgcggcactggcccgtaagctctgcagccgtaacacgagtatc
ggcgccgatggaatcgaattcctggagcggaggccgaatggagagttttttcttcgcctc
ttcaacgccgatggcagtgaggcggaactctccggcaatggaacgcgctgcgtcgccgcg
tggcttgcgagctctgagggcagggaccaggtcgtcttcggcacgcacggcgggccgaga
agctgccgggtagtcgaggatgccgatccgctttatctggtcgagagcgagatgggggtt
ccccgcgtgatggagcgcacgatcgagattccggagatcggacaggtcgcaggcgcgatg
gtcaatgtcggaaatccacactttgtgatcttcgtggaatcggaggacttcagctctcat
ggactctcctggcaggagctgggaggccacatcagcgttagttctttgtttccccacggc
accaatgttgagtttgtgaaagttctctccggcggagagatcgcattccggatcttcgag
cgcggatgcgggcccacaacctcgtcagggacgggaacatgcgcgtcttcggctgcagct
atggcgctcaggggagtcgatcgtgagctgaaggcggttgccgaaggcggtgcgcagcgg
accgtatggctgagcagcgaagaggtgatgcggttgaccgggccggcggagattatctgc
cacggagaggtcttcggcctgtga
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