Edaphobacter sp. 12200R-103: GWR55_18625
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Entry
GWR55_18625 CDS
T06408
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eda
Edaphobacter sp. 12200R-103
Pathway
eda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GWR55_18625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eda03021
]
GWR55_18625
03400 DNA repair and recombination proteins [BR:
eda03400
]
GWR55_18625
Enzymes [BR:
eda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GWR55_18625
Transcription machinery [BR:
eda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GWR55_18625
DNA repair and recombination proteins [BR:
eda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GWR55_18625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QHS53502
UniProt:
A0A6B9YUM0
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All DBs
Position
4478645..4479736
Genome browser
AA seq
363 aa
AA seq
DB search
MLWRGFQKPKRLAVDSESLTEKYGKFSAQPFERGFGTTIGNALRRTLLSSIEGAAVTAVR
IEGVLHEFQSIAGVVEDATDIILNLKQIPFKLNGEGPKALYLRSDAAGIVTSGSIEADGD
VEILDKDVYICTVSEGGKIDMEMRLKRGRGYVSADKNFDADLGLGFIPVDSVHSPVRKVN
YLVEAARLGQITDYDKLTLEIWTNGTVSPADSLGLAAKLLKDHMTIFINFEEELETGHDG
VHDGPAIRNENLNRSVEELELSVRSYNCLKNANIATIGELIQKTEAEMLKTKNFGRKSLN
EIKEILAQMGLSLGMKIDENGNPQPGPTSVLPAATLAASFGHFDDEDEDEEDDLNLPAET
DQF
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgctttggagaggattccagaagcccaagcgcctcgcagtcgacagcgagtctctcacc
gaaaagtacggcaagttcagcgcgcagccctttgagcgtggtttcggcaccaccatcggc
aacgcactccgtcgcaccctgctctcgtccatcgagggagctgccgtaacggcggtccgc
atcgagggcgtgctgcacgagttccagtccatcgccggcgtcgttgaggacgcgaccgac
atcatcctcaacctcaagcagattccgttcaagctcaacggcgagggccccaaggctctc
tacctgcgctccgacgctgccggtatcgtcacctccggttccatcgaggccgacggcgat
gtcgagattctcgacaaggacgtctacatctgcacggtctccgaaggcggcaagatcgac
atggagatgcgtctcaagcgcggccgcggctacgtctcggctgacaagaacttcgacgcc
gatctcggacttggcttcattcccgtcgatagcgtccactccccggtccgtaaggtcaac
tatctcgtcgaggctgctcgtctcggtcagattaccgactatgacaagctcacgctcgag
atctggacgaacggcaccgtctctccggctgattctctcggtctcgcagcgaagttgctc
aaggaccacatgaccatcttcatcaacttcgaagaggagttggagaccggtcacgatgga
gtccacgacggccccgccatccgcaatgagaatctcaaccgctccgtcgaggagctcgag
ctctcggttcgcagctacaactgcctgaagaatgccaacatcgcgaccatcggtgagctg
atccagaagactgaggccgagatgctgaagaccaagaacttcggccgcaagtccctgaac
gagatcaaggagatccttgctcagatgggtctttcgctcggcatgaagatcgacgagaac
ggcaacccgcagcccggaccaacctcggttcttccagcagccactctcgccgccagcttc
ggccacttcgacgatgaggacgaggatgaagaagacgacctcaacctccccgccgaaacc
gatcagttctaa
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