Enterococcus devriesei: AAEO79_00550
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Entry
AAEO79_00550 CDS
T10952
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ede Enterococcus devriesei
Pathway
ede03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ede00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAEO79_00550 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ede03019
]
AAEO79_00550 (rny)
Messenger RNA biogenesis [BR:
ede03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AAEO79_00550 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
ATP-synt_B
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
XHM44117
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Position
111377..112933
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AA seq
518 aa
AA seq
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MLVPILLAIIGLIVGLGLGFMVAKSRHEKEIDGAQNTARGIITHANKEAETLKKEALLEA
KEENQQYRAQVESELKESRQELKSQENRLLQREQTLDRKDDSLEKREHSLEEKETKISAR
QQLIDEREKDVEQLIDEQKTKLEQVASLTKDEAKEMIMKTTEEELNHELNVMVRESEQRA
KEEADRKAKNLLAMAIQRCGADAVSETTVSVVTLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVVLSGFDPIRREIARMTLEKLIQDGRIHPARIEEMVEKSRKEMDERIREY
GEQAAFEVGAHTLHPDLIKILGRLHFRTSYGQNVLNHSIEVAKLTGVLAAELGEDVQLAQ
RAGLLHDIGKALDHEIEGSHVEIGAELAAKYRENSVVINAIASHHGDTEATSVISVLVAA
ADAVSAARPGARSESLENYIRRLENLENISNSFDGVESSFAVQAGREVRVMVKPEEISDL
DSVRLVRDIRRKIEDELDYPGHIKVVVIRETRATDYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttagttccgattctcctcgctatcatcggtttaattgtcggtcttggtttgggtttc
atggtggcaaaatcacgccatgaaaaagaaattgatggggcacaaaacacagctagaggg
atcattacgcatgctaataaagaggcggagaccttaaagaaagaagctttgttggaagcc
aaggaagaaaaccagcagtatcgcgcacaagttgaaagtgagttgaaagaaagcagacaa
gaattaaaatcgcaagaaaatcgcttgcttcaaagagaacaaaccttagatcgtaaggat
gattctcttgaaaagcgtgagcactcacttgaagaaaaagaaacaaaaatcagtgctaga
cagcaattaattgacgagcgagaaaaagatgtagaacaactgatcgatgaacaaaaaaca
aaacttgaacaagttgcgtcattaactaaagatgaagcaaaagaaatgattatgaagacg
acggaagaggaactgaaccatgaattgaacgtcatggtcagagaatctgaacaacgggcc
aaagaagaagctgatcgcaaggcgaaaaatcttctggcaatggctattcaacgttgtggt
gcggatgccgtttctgagacaaccgtttcagtggtaactttaccaaatgatgagatgaaa
ggtcgcatcattggacgtgaaggccgtaatatccggacgttagaaacattgacggggatt
gatttgatcattgatgataccccagaagcagttgttttatcaggctttgatccaatcaga
cgggaaattgcccgcatgactttggaaaaattgattcaagatggtcgaatccatccagca
cgaatcgaagaaatggtcgaaaaatcgcgtaaagaaatggatgaacgcattcgcgaatat
ggggaacaagcagcctttgaagtgggcgctcataccttgcatccagatttgatcaagatt
ttaggacgtttgcatttccgtaccagctacggtcaaaatgttttgaaccattccatcgaa
gttgccaagttgacgggagtccttgccgcagaattaggcgaagatgttcagttagcacaa
cgcgctggcttgcttcatgatatcggtaaagcgttagatcatgaaatcgaaggttcgcac
gttgaaattggggcagaacttgccgctaaatatcgtgaaaactcagtagtcatcaatgcc
atcgcttctcaccatggagacaccgaagccacttcagtgatttccgtattggttgccgca
gcagatgccgtatcagctgcacgaccaggagcacgaagcgaatcactagaaaactatatt
cgccgtttagaaaacttggaaaatatttccaacagctttgacggagtagaatcaagcttc
gcagttcaagctggacgagaagttcgtgtcatggttaaaccagaagaaatttcagatttg
gattctgttcgcttagtccgcgacatccgtcgtaagatcgaagacgaattagattatcca
ggacacatcaaagtcgtggttattcgtgaaacacgagcaaccgattatgcaaaatag
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