Enterococcus devriesei: AAEO79_05170
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Entry
AAEO79_05170 CDS
T10952
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ede Enterococcus devriesei
Pathway
ede02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ede00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AAEO79_05170 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ede03021
]
AAEO79_05170 (rpoD)
Transcription machinery [BR:
ede03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AAEO79_05170 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
XHM44991
LinkDB
All DBs
Position
1051655..1052764
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AA seq
369 aa
AA seq
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MADVKNNKEYQKALAAFIKEKKPLGQVVYDELTNRMATPYALNAEAMDALIQKVEDAGIS
VVDENGEPSKASLKQNEKTAKAAQKEDLSAPTGVKINDPVRMYLKEIGRVSLLTAQEEVE
LALLIEQGDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTPEEI
GAEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPAEHAASEMLKEQ
LEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRHPSR
SKQLKDFLE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgtaaaaaacaacaaagagtaccaaaaagctttagcagccttcatcaaggaa
aagaaacctttgggacaggtggtttatgatgaactaaccaatcgtatggcgactccttat
gcgttgaacgctgaagcgatggatgcattaatccaaaaagtcgaagatgctgggatcagt
gtcgttgatgaaaatggtgaaccttcaaaggctagtttaaaacaaaatgaaaaaacggca
aaagccgctcaaaaagaagatctttccgctccaactggtgtgaagatcaatgatccggtt
cggatgtacttaaaagaaatcggccgtgtgtcattattaacagcgcaagaagaagttgaa
cttgctttgttaatcgaacaaggagatcaagaagcgaagcaacgtttagcggaagccaac
ttacgtttagtagtaagtatcgcgaagcgttatgtcggtcgtggaatgcaattccttgat
ttgatccaagaaggaaatatgggcttaatgaaagccgtcgaaaaatttgattatcgcaaa
ggattcaaattctcaacttacgcgacttggtggattcgtcaagccatcactcgtgcgatc
gctgaccaagcgcggacgattcggattccggtccatatggttgaaaccatcaataaattg
attcgggtacaacgtcaattactgcaagatttaggtcgggaaccgacaccggaagaaatt
ggtgcggaaatggatctgccaacagaaaaagttcgtgaaatcttgaaaatcgctcaagag
cctgtgtcattggaaacaccaatcggtgaagaagatgattcacatctaggtgatttcatc
gaagaccaagaagcgactagtccggctgaacatgcggcttctgaaatgttgaaagaacaa
ttggaagatgttttggatacattgacggaccgtgaagaaaatgtcttgcgtcttcgcttt
ggtttagatgacggtcgaactcgtacattggaagaagtcggtcgagtctttggggttact
cgtgaacggattcgtcagatcgaagccaaagccttacggaaattacgccacccatcacgc
tctaaacaattgaaagactttttagaataa
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