Enterococcus devriesei: AAEO79_07345
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Entry
AAEO79_07345 CDS
T10952
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ede Enterococcus devriesei
Brite
KEGG Orthology (KO) [BR:
ede00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ede03009
]
AAEO79_07345 (rlmD)
Enzymes [BR:
ede01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AAEO79_07345 (rlmD)
Ribosome biogenesis [BR:
ede03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AAEO79_07345 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
PrmA
N6_N4_Mtase
Methyltransf_11
RrnaAD
Methyltransf_32
Methyltransf_12
DOT1
PCMT
TPMT
Motif
Other DBs
NCBI-ProteinID:
XHM42900
LinkDB
All DBs
Position
complement(1503203..1504564)
Genome browser
AA seq
453 aa
AA seq
DB search
MTIEKNQTYTVTIDDLSYEGLGVAHIEGFPLFVENALPDEKVTIKAVKVGKKFGYGKVME
RFNDNPERQEVKDLDLLRSGIAPLSHMTYDYQLRFKQEQIQKVLKSIAKMPELPVETTLG
MKDPFGYRNKAQIPVQKVENKLTTGFYRKNSHTLLPIENYLIQDLAIDQAIITVRDILQR
FNVKAYNERDNTGFIRHIVIRRGHYSHEMMVILVTRTERFFKGVEIAEVIKKELPEVVSV
IQNVNPEKTNVIMGREEKVLLGKTTIDDTLLGKTYRISSQSFYQVNTEQTEVLYQIAIDL
ADLNKEDIVVDAYCGIGTIGLSLAEKVKHVYGVEIVPQAIEDAKANAKRNGIENANYEVG
KAEKIMPRWAREGIEPSVVFVDPPRKGLDEKFIEASVAANPEKIVYISCNPATLARDLKR
YEAFGYQAVKVQPVDLFPQTHHVESVTLLVKAV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagaaaaaaatcaaacctatacagtgacaatcgatgacctgtcttacgaaggg
ttaggcgttgcacatatcgaaggattcccgctctttgttgaaaatgcgttacctgacgaa
aaggtgacgatcaaagcagttaaagtcggcaaaaaattcggctatggaaaagttatggaa
cggttcaatgacaatcctgaacgccaagaagtaaaagacttagacttattaagaagcgga
atcgcacctttgagccatatgacctatgactatcagttgcgtttcaaacaagaacaaatt
caaaaagttttgaaatcaatcgctaagatgcctgaacttcctgttgaaacgacattaggg
atgaaagatccttttggttatcgcaacaaagcacagattccagtacaaaaagttgaaaat
aaattgacgacgggcttttaccgtaaaaattcgcatacgttgctaccgatcgaaaattat
ttgatccaagatctagcaatcgatcaagcgatcatcactgtgcgagacatcttgcaacgt
ttcaacgtaaaggcctacaacgaacgagacaatactggtttcattcgacatatcgtgatt
cgacgcggacattacagccatgaaatgatggtgatcttggtgacgcggaccgagcgtttc
tttaaaggcgtggaaatcgcagaagtgatcaaaaaggaattgcctgaagtagtttcagta
attcagaatgtcaatccagaaaaaaccaatgtcattatgggacgtgaagaaaaagtcttg
ttgggcaagacgacgatcgatgatacgttgttaggaaaaacgtatcggatttcatctcag
tcattttatcaagtcaataccgagcaaactgaagtattgtaccaaatcgcaattgatctg
gctgatttgaacaaagaagacatcgttgtagatgcttactgtgggatcggtacgattggg
ttgtcattagcggaaaaagtcaaacatgtttacggagtggaaatcgttcctcaagcaatc
gaggatgcgaaagccaacgcgaaacgcaatgggatcgaaaatgccaattatgaagtcggt
aaagctgaaaaaattatgccacgttgggctcgtgaaggtattgaaccatccgttgttttt
gttgatccaccaagaaaaggcttggatgaaaaattcattgaagcttctgtagccgcaaat
ccagaaaaaattgtttatatctcttgcaacccagcgacattggctcgcgatttgaaaaga
tatgaagcttttgggtatcaagcggtaaaagttcaaccagttgatttattccctcaaacc
catcatgtggaatcagtcacattattagtaaaggcggtgtaa
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