Edaphobacter sp. 4G125: H7846_02185
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Entry
H7846_02185 CDS
T08591
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
edg
Edaphobacter sp. 4G125
Pathway
edg00521
Streptomycin biosynthesis
edg00523
Polyketide sugar unit biosynthesis
edg00525
Acarbose and validamycin biosynthesis
edg00541
Biosynthesis of various nucleotide sugars
edg01100
Metabolic pathways
edg01110
Biosynthesis of secondary metabolites
edg01250
Biosynthesis of nucleotide sugars
Module
edg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
edg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H7846_02185 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H7846_02185 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
H7846_02185 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H7846_02185 (rfbB)
00525 Acarbose and validamycin biosynthesis
H7846_02185 (rfbB)
Enzymes [BR:
edg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
H7846_02185 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QNI37162
UniProt:
A0A7G8BX92
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All DBs
Position
527462..528580
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AA seq
372 aa
AA seq
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METKQKDAGTPILVTGGAGFIGSNFVLEWLAAGKGPVVNLDKLTYAGNHENLVTVEESPA
YTFIHGDICDAALVKGLLEKHRPRAVVHFAAESHVDRSIHGPEAFLRTNIDGTFTLLQAA
RAYFGSLTGEERDGFRFLHVSTDEVYGTLEPEDPAFHEETPYAPNSPYAASKAASDHLVR
AWVHTYGLPAMITNCSNNYGPYQFPEKLIPLMIANARKGKPLPVYGDGQQVRDWLYVTDH
CRALMTVLERGQVGETYNVGGGNQRSNLEVVTTLCALLDELSPESPLKPHKQLITYVADR
PGHDRRYAIDARKLEGELGWRAQESFETGLRKTVEWYLANTAWVGSVTSGAYQQWVKQNY
GTREGIAAEETR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaagcaaaaagatgctggcacaccgattcttgtgactggcggcgccggattt
attggctcgaactttgtgctggaatggctggccgcaggtaagggtccagtggtgaatctc
gataagctaacgtatgcgggcaatcacgagaatctggttactgtggaagagagcccggca
tacactttcattcatggcgacatctgcgatgctgcattggttaaggggcttctggagaag
caccggccgcgtgcggtggttcactttgcggcggagagccatgtggaccgttccattcat
gggccagaggcgtttctgaggacgaatatcgacggtacctttactctgctacaggcggcg
cgggcgtacttcggatcgctaacgggtgaggagcgagacggcttccgatttttgcatgtc
tcgaccgatgaggtttacggcacattggaaccggaagatccggcttttcatgaggagaca
ccgtatgctccaaactcgccttatgctgcttcgaaggcggcgagcgatcatcttgtgcgg
gcttgggtgcatacctatgggcttccggcgatgattacgaattgttcgaacaactatggg
ccgtatcagtttccggagaagctgattccgctgatgatcgcgaatgctcgtaagggcaag
cctctgccggtgtacggtgatggccagcaggtgcgtgactggctttacgtgacagatcat
tgccgtgcgctgatgacggtgctggaacgcggccaagtgggcgagacctacaatgtgggc
ggaggaaatcagcgcagcaaccttgaggtggtgacaacgctttgtgcattactggatgaa
ctttcgccggagtcgccactcaaaccacataaacagctgatcacgtacgtggcagaccgg
ccaggacatgatcgaagatacgcgatcgatgcgcggaagctcgagggtgaactggggtgg
agagcacaggagagctttgagaccggcctgcgcaagacagtggagtggtatctggcgaat
acagcctgggtggggagcgtgaccagcggagcgtatcagcagtgggtgaaacagaactat
ggcacacgtgaagggattgctgcggaggagacgcgatga
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