Edaphobacter albus: H7846_07825
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Entry
H7846_07825 CDS
T08591
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
edg
Edaphobacter albus
Pathway
edg02024
Quorum sensing
edg03060
Protein export
edg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
edg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
H7846_07825 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H7846_07825 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H7846_07825 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
edg02044
]
H7846_07825 (ffh)
Enzymes [BR:
edg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
H7846_07825 (ffh)
Secretion system [BR:
edg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
H7846_07825 (ffh)
Eukaryotic Sec-SRP protein
H7846_07825 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
ArsA_ATPase
6PF2K
AAA_33
AAA_31
CLP1_P
nSTAND3
AAA_30
AAA_19
APS_kinase
NPHP3_N
cobW
AAA_17
KTI12
Thymidylate_kin
MeaB
ParA
MipZ
ATP_bind_1
KAP_NTPase
AAA_18
LpxK
HrpB4
Motif
Other DBs
NCBI-ProteinID:
QNI38145
LinkDB
All DBs
Position
complement(1879582..1880967)
Genome browser
AA seq
461 aa
AA seq
DB search
MFENLSEKLQRSFKNLRGQGTLTEENISDALREIRIALLESDVNLAVVDQLIEHIRTRAL
GSQVATALSPTEQIVKIVNDELVNLLGKDTARFQKSSQPPSVILMAGLQGSGKTTTSGKL
AQWLKKAGHRPMLVSVDVYRPAAREQLRLVAQSISANLYEGKVESAKPGSDDVLRLAKEA
KREAANFGCDMLIVDTAGRNHIDAELMDEMAALKKLLNPSEILFVADAMTGQDAVNSAKA
FNDRLAITGAVLTKMDGDARGGAALSIRHITGQPIKFLGTGEKPDAFEPFHPDRIVSRIM
GHGDIATLIERAEEKLDKGKAEAFAKKALSGDGFTLEDFRDQLRQIKKMGSMKSILKMLP
SVGPFAGMSQAIDNVDEGQFTRVESIINSMTKRERLDHEIINGSRRKRIAHGSGTSVQDV
NNLLRQYAQMRKVFKTMGSGGGIKAQQRMMSQLQGRQRFGR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatctctctgaaaaactccagcgatcctttaagaacctccgcggccagggc
acccttaccgaagagaacatctccgacgccctgcgcgagatccgcatcgccctgctcgaa
tccgacgtgaaccttgccgtcgtcgaccagctcatcgagcacatccgcacccgcgctctc
ggttctcaggtcgccaccgctctctcacccaccgaacagatcgtcaagatcgtcaacgac
gagctcgtcaatctcctcggcaaggacaccgcccgcttccagaaatcctcgcagcccccc
tccgtcatcctcatggcaggcctgcagggctccggtaagacgaccacctccggcaagctc
gcccagtggctcaaaaaggccggacaccgccccatgcttgtctccgtcgacgtctaccgt
cccgccgcgcgcgagcagttgcgcctagtcgctcagtccatcagtgccaatctctacgag
ggcaaggtcgagtccgcgaagcccggttccgacgacgtcctccgtctcgcaaaagaagcc
aagcgcgaagccgccaacttcggctgcgacatgctcatcgtcgacaccgccggccgcaac
cacatcgacgccgagctcatggacgagatggcggcgctcaaaaagctgctcaacccctcc
gagatcctcttcgtcgccgacgccatgaccggccaggacgccgttaactccgcaaaggcc
ttcaacgatcgcctcgccatcaccggagccgtcctcaccaagatggacggcgacgcccgc
ggcggcgctgccctctccatccgccacatcaccggccagcccatcaagttcctcggcacc
ggcgaaaagcccgacgccttcgagcccttccaccccgaccgcatcgtctcccgcatcatg
ggacacggtgacatcgccaccctcatcgagcgcgccgaagaaaaactcgacaagggcaag
gccgaggccttcgccaagaaggccctctccggcgacggcttcaccctcgaggacttccgc
gaccagctccgtcagatcaaaaagatgggctccatgaagtccattcttaagatgctgccc
tccgtcggccccttcgccggaatgtcgcaggccatcgacaacgtcgacgaaggccagttc
acccgcgtcgaatccatcatcaactccatgaccaagcgtgagcgtctcgaccacgagatc
atcaacggctcccgccgcaaacgcatcgcccacggctccggaaccagcgtgcaggacgtc
aacaacctcctgcgccagtacgcccagatgcgaaaggtcttcaagaccatgggctcaggc
ggcggcataaaggcccagcagagaatgatgagccagcttcaaggacggcagcgcttcggt
agataa
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