Edaphobacter albus: H7846_09030
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Entry
H7846_09030 CDS
T08591
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
edg
Edaphobacter albus
Pathway
edg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
edg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H7846_09030 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edg03400
]
H7846_09030 (uvrB)
DNA repair and recombination proteins [BR:
edg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H7846_09030 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H7846_09030 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
Microtub_bd
SWI2_SNF2
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
QNI35254
LinkDB
All DBs
Position
complement(2163530..2165518)
Genome browser
AA seq
662 aa
AA seq
DB search
MDFQLTTNYKPQGDQPRAIGELVSGLHAGEKDQVLLGVTGSGKTFTMAKVISEVNRPALI
LAHNKTLAAQLYHEFKQFFPHNAVEYFVSYYDYYQPEAYIPSGDLYIEKEATINEELDKL
RLSATRSLFERRDCIIVSSVSCIYGLGSPEAYYGMLLMLEKGQRVRREDITRRLVEILYD
RNDVDFRRGTFRVRGDVIEVYPTYDENAYRIELFGDEIDSLSQIDPLFGTVKQKYARLPI
YPKSHYVVQPERKATAIDSILAELFDWEAQLEKEGRLVESQRIHQRTRFDLEMIKSVGYC
HGIENYSRHMSGRLPGEPPPTLLDYFPRDYLIFIDESHVTVPQLHGMWHGDRSRKQNLID
YGFRLPSALDNRPLRFEEFEARTGQIIYVSATPGPYELTKSAGVVIEQIIRPTGLTDPEV
EIRPVKGQIDDLLAEIRERAAKNQRVLVTTLTKRMAEDLAGYYTEVGVRCRYMHSEIETL
ERIKLLRDLRKGEYDVLIGINLLREGLDLPEVSLVAILDADKEGFLRSQGSLIQTIGRAA
RHLEGRAILYADSMTESMQRAIDETNRRREIQEAYNEENGITPQSIIRPTDMALAGILKA
DYADLTEETDEMPEFANQEELDTYIARLETEMREAAKKFEFEKAAKLRDTVKELRTKEFL
FS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggattttcaattaacgaccaattacaagccgcagggcgaccagccccgcgccatcggt
gaactcgtctctggacttcatgccggcgaaaaagaccaggtcctgctcggcgtcaccggc
tcaggcaagaccttcaccatggccaaggtcatctccgaggtcaaccggcccgcactcatc
ctggcacacaacaagacgctcgctgcgcagctctatcacgagttcaagcagttctttcca
cacaacgcggtcgagtacttcgtctcttattacgactactaccagcccgaggcctacatt
ccttccggtgatctctatatcgagaaagaggccaccatcaacgaggagctcgacaagctc
cgcctctccgccacgcgctccctcttcgagcgccgcgactgcatcatcgtctcctccgtt
tcctgcatctatggcctcggctcgccggaagcctactacggcatgctccttatgctcgaa
aaaggccagcgcgtccgccgcgaagacatcacccggcgtctggtggagatcctctacgac
cgcaatgatgtcgacttccgtcgtggaaccttccgcgttcggggtgacgtcatcgaggtc
tatccaacttacgacgagaacgcttatcgcatcgagctctttggcgacgagatcgactcg
ctctcgcagatcgacccgctcttcggcaccgtcaagcagaagtatgcgaggcttcccatc
taccccaaatcgcactacgtcgtgcagcccgagcgtaaggccacagccatcgattcgatt
ctcgccgagctcttcgattgggaggcccagcttgaaaaagaaggccgcctcgtcgagtcg
cagcgcatccaccagcgcacccgctttgatctcgaaatgatcaagtccgtcggctactgc
cacggcatcgagaattactcgcgtcatatgtccggccgcctgcccggcgagccaccgccg
actctgctggactacttcccgcgcgactatctcatctttatcgacgagtcgcatgtcacg
gtcccgcagcttcatggcatgtggcacggtgatcgctctcgcaagcagaacctcatcgac
tacggcttccgcctaccttccgcactcgacaatcgccctttgcgcttcgaggagttcgaa
gcccgtacaggacagatcatttacgtctcggcgacacccggcccctacgaactcaccaaa
tccgcaggcgtggtcatcgaacagatcattcggcccaccggactcaccgatcccgaggtc
gagatccgtcccgtcaaaggacagatcgacgatcttcttgctgagattcgcgaacgggcg
gccaaaaaccaacgcgtgcttgtgaccaccctcaccaaacgtatggctgaggatcttgcc
ggatactacaccgaggttggcgtgcgctgccgttatatgcactctgagatcgaaactctc
gagcgcatcaagcttcttcgtgatctgcgcaaaggcgagtacgacgttctgattggcatc
aatcttctacgtgaaggactcgaccttcccgaggtgtcgcttgtcgccattctcgatgcc
gacaaggagggtttcttgcgctctcaaggctcactcatccagaccatcggccgcgctgca
cggcacctcgaaggccgtgccattctttatgccgattcgatgacagaatccatgcagcgc
gccatcgacgaaaccaatcgtcgacgcgaaatccaggaggcttataacgaagagaacggc
attactccgcagtccatcatccggcccaccgatatggcgcttgctggaatcctgaaggcc
gattacgccgatctcaccgaagagaccgacgagatgcccgagttcgccaaccaggaagaa
ctggacacctacattgccaggcttgagaccgagatgcgtgaggccgctaagaagttcgaa
tttgagaaggccgccaaattgcgcgacaccgttaaggagcttcgcacaaaagagttcttg
ttcagttaa
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