Edaphobacter albus: H7846_09220
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Entry
H7846_09220 CDS
T08591
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
edg
Edaphobacter albus
Brite
KEGG Orthology (KO) [BR:
edg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
edg03016
]
H7846_09220
Enzymes [BR:
edg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
H7846_09220
Transfer RNA biogenesis [BR:
edg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H7846_09220
Prokaryotic type
H7846_09220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QNI35287
LinkDB
All DBs
Position
complement(2200340..2201158)
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AA seq
272 aa
AA seq
DB search
MHYWKITIAYDGTPYHGWQIQPSLSTVQGTLAEVLRHITGEEVLPQGSGRTDTGVHALGQ
VASVSLQSPIPGPNLQRALNHLLPASIRIRSIDATSHNFHARHSARRKTYEYRIAPQPVC
LPMLAPFVWNCTWPLNLEAMDQAAQYVVGTHDFTSFAATDPDLAVRNENSQDGSGEPDHE
KQREKTAIRTIFASNWYRESDLLVYRVTGSGFLHHMVRNLVGTLVDVGRGRTPVGSISKI
LAARARSAAGPTAPPHGLFLLHVDYESRDESH
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcattattggaagataaccattgcctatgatggcacaccgtaccacggctggcagatt
caacccagcctgtccacggtccaggggacgctggcagaagtgttgcgccatatcacggga
gaagaggtcctaccccagggttcagggcgcaccgataccggagttcatgccctggggcag
gtcgcttccgtatcacttcagtctcccattccgggtccaaacctgcaacgtgccttgaac
catcttcttcctgccagtattcggatccgctctatagatgccacttcacacaacttccac
gcccgccacagcgctcgccgcaaaacctacgaataccgcatcgcaccccagcccgtttgc
ctccctatgcttgcccccttcgtctggaactgcacctggccgctaaatctggaagcgatg
gaccaagccgctcaatacgttgtcggaacccatgactttacctccttcgctgcaaccgat
ccagaccttgcagtccgcaatgaaaacagtcaggacggctctggcgaaccagatcatgaa
aaacagagagagaagactgctattcgcacaatctttgcctccaactggtatcgcgaatcc
gatctcctggtctaccgtgtcaccggctccggattcctccatcacatggtccgcaacctt
gtcggcacacttgtcgatgtagggcgcggacgcaccccagttgggtccatttccaagatt
cttgccgctcgcgctcgttctgccgccggcccaaccgctcctccgcatggcctttttcta
ctgcatgtggattacgagtcacgggatgaatcgcactaa
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