Edaphobacter sp. 4G125: H7846_15240
Help
Entry
H7846_15240 CDS
T08591
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
edg
Edaphobacter sp. 4G125
Brite
KEGG Orthology (KO) [BR:
edg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
edg03032
]
H7846_15240 (topA)
03400 DNA repair and recombination proteins [BR:
edg03400
]
H7846_15240 (topA)
Enzymes [BR:
edg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H7846_15240 (topA)
DNA replication proteins [BR:
edg03032
]
Prokaryotic type
DNA Topoisomerases
H7846_15240 (topA)
DNA repair and recombination proteins [BR:
edg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H7846_15240 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Dala_Dala_lig_C
FAM25
Yop-YscD_ppl_3rd
Motif
Other DBs
NCBI-ProteinID:
QNI36316
UniProt:
A0A7G8BUU6
LinkDB
All DBs
Position
complement(3638559..3641414)
Genome browser
AA seq
951 aa
AA seq
DB search
MAKSLVIVESPAKAKTIGKYLGSDYTVEASIGHIMDLPKNDIGVELKKRTFEPTLIVSPG
KEKVVDRLKKLAAKADVVYLAPDPDREGEAIAAHLSMQLMPVVKDKKRVRRVTFNEITQK
AVRAAFEHARDVDENLVDAQQTRRVLDRLVGYQISPLLWDKVRRGLSAGRVQTVALRLIV
EREQEINDFKPVEYWTIDADLLPGGGKQGFTARFIGVNGVPSRVANGLDEDGKDQFLANA
LPNKTSIDEVVRELEVAKWSVRSVEKKERRNNPKAPFTTSKLQQDAAGRLGFNVRRTMGV
AQRLYEGIELGNEGTVGLITYMRTDSTRVSPDAITEVREYIGKLGSQYLPGKPNEYAGKK
QVQAQDAHEAIRPTSVKFTPDSIRRYLSDEQYRLYKLIWQRFVASQMTPAVFDQTTVEIE
AKAKLTYDFRVSGSVLKFDGHLKFEEEEKRARQAAKDKAAKEEKLAQTNATAAEGDGEED
SERRLPELTAGEALKLEKLDPQQKFTQPPPRYNEASLVKTLEEKGIGRPSTYASIINTIQ
DRDYVKKITGRFVPTEIGIVVTKLLVKNFPYIFDTQYTATLEGELDAVEDGQERWTDLLN
AFYEHFEKELKVAEKHMEDIKRMEEPTQEVCEKCGSPLVLKWGKFGSFFSCSNFTKSKPM
NVAAGPWKKDSKAVIKKIVSEFTFPMTVKAVTEDVIDFSREAKDAKELTEAINAAQGKGK
KVVVETFSCDFTKENYAAKPDLSAPGADEADEEEFCDNCGRVMVLRNGPWGPFMACPGYN
EDPPCKTIRKLTQKVQQKPPVQLEESCPKCGKPLLLRNGQYGEFISCSGYPKCKYIKQDL
LDVPCPKCGGDIAARKTKRGDVFYGCVNYPKCDFASNQKLINETCPKCESAYLLEVSNDK
GVFWVCPNNQDALPKRRKRKGAAEEAAPTTPPCSYEKKVGEPVESPEGAAA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtcacttgtgatcgtagagtcgccggcgaaggcgaagacgatcggaaaatat
ctcggcagcgattacacggtggaggcctccattggccacatcatggacctgcccaaaaac
gatatcggcgtcgagctgaagaagcgcacgtttgagccgacattgatcgtctctcctgga
aaggagaaggttgtcgatcgcctgaagaagctggcggcgaaggccgatgttgtttacctg
gcgcctgaccccgatcgcgagggtgaggccattgcggcgcatctttcgatgcagctgatg
cctgtagttaaggataagaagagagttcgtcgggtgacctttaatgagatcacccagaag
gcggtgagagctgccttcgaacacgctcgggatgttgatgagaatctggttgacgcgcag
caaacccgccgcgtactcgaccgccttgtgggatatcagatctctccgctgctgtgggac
aaggttcggcgcggattgagtgcagggcgagtccagacggtggccctacgcctgattgtg
gagcgcgagcaggagatcaacgacttcaaaccagttgaatactggaccattgatgccgat
cttctacctgggggtggcaaacagggttttacagcgagatttatcggagtcaacggcgtt
ccgtcgcgagtcgcgaatgggttggatgaagatggtaaagatcagtttcttgccaacgct
cttcccaacaagacttcgatcgatgaggttgttcgcgaacttgaagttgcgaagtggtct
gtgcgttctgtcgaaaagaaagaacgccgaaacaaccccaaggctccctttaccaccagc
aagctgcagcaggacgcagcaggacgcctgggcttcaatgtccggcgcactatgggtgta
gcgcagcgtctgtatgaaggcatcgagctgggcaacgagggtaccgtcggtctgatcacc
tatatgcgtactgactccacgcgtgtgagcccggacgctatcactgaggtgcgcgagtac
atcggtaagctgggatcgcagtatctcccgggcaagccgaatgagtatgcaggcaagaag
caggtgcaggcgcaggacgcccacgaggccattcgcccgacatcggtgaagttcactccc
gattcgatccgacgctatctttcggacgaacagtaccggctttacaagctgatctggcag
cgttttgttgccagccagatgacgcctgcggtcttcgatcagaccacggtggagattgag
gcgaaggccaaactgacctacgacttccgcgtaagcggcagcgtgctgaagtttgacggc
catctgaagttcgaagaggaagagaagcgtgctcgtcaggctgcgaaggacaaggcagcg
aaggaagagaagctggctcagacgaacgcgacagcagctgaaggtgatggggaagaggac
tccgagcgaaggctccctgaactgactgctggagaggcgttgaagctggagaagctcgat
ccgcagcagaagtttactcagcctccgccacgttataacgaagccagcttggtgaagact
cttgaagagaagggtattggccgtccttcgacgtatgcgtccatcattaacacgatccag
gaccgtgactatgtaaagaagatcaccggccggtttgtgccaaccgagatcggaatcgtc
gtcaccaagctcttggttaagaacttcccctacatcttcgatacgcagtacacggcaacg
cttgagggagagttggatgctgtagaagatggccaggagcgctggacggatctgttgaat
gctttctatgaacactttgaaaaagaactcaaggtcgctgaaaagcacatggaagacatt
aagcggatggaggagccgacccaggaggtgtgtgagaagtgcggctcgccactggtccta
aagtggggcaagttcggcagcttcttctcttgttccaacttcacgaagtccaagccgatg
aatgttgcggccggcccgtggaagaaggattccaaggcggtcatcaagaagatcgtgtcg
gagtttaccttccctatgacggtgaaggccgtcaccgaggatgtcatcgacttcagccgc
gaggcgaaggatgcgaaggagttaaccgaggccatcaatgcggctcagggtaaagggaag
aaggttgtcgtcgagaccttcagctgtgacttcaccaaggagaactatgcagcaaagccg
gacctgagcgctcccggagccgacgaggctgatgaagaagagttctgcgacaactgcgga
cgcgtgatggtgcttcgcaatggtccatggggaccgttcatggcctgtccgggctacaac
gaagatcctccgtgcaaaacgatccgcaagctgacccagaaggtgcaacagaagcctccg
gtgcagctggaagagagctgtccgaagtgtggcaagccattgcttctgcgcaatggtcag
tacggcgagttcatcagctgtagtggatatccgaagtgcaaatacatcaagcaggacctg
ctggatgtgccttgcccgaagtgcggaggcgacatcgcagcacgaaagacgaagcgtggc
gatgtgttctatggctgcgtgaactatcccaaatgcgattttgcttcgaaccagaagctc
atcaatgagacctgcccgaagtgcgagagtgcctatttgctcgaggtttccaacgataag
ggcgtcttctgggtatgcccgaacaatcaggacgccttgccgaagcgtcgtaagcggaag
ggcgctgcggaagaggcggctccgacaactcctccttgtagctacgagaagaaggtcggt
gagcctgtagagagtccggaaggcgcagcggcttaa
DBGET
integrated database retrieval system
