Escherichia coli DH1: EcDH1_0306
Help
Entry
EcDH1_0306 CDS
T01996
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
edh
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
EcDH1_0306
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
S1
HHH_9
HHH_7
YqgF
S1_RRP5
OB_PDCD11
T2SSK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
ACX37996
LinkDB
All DBs
Position
complement(344058..346379)
Genome browser
AA seq
773 aa
AA seq
DB search
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL
SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE
AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV
RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR
ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH
TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL
KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN
VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgattcgttctgccgcattattgcgggtgaaattcaggcgcgcccggaacag
gttgacgctgccgttcgcctgcttgacgaagggaataccgtgccgtttatcgcacgttat
cgtaaggaaatcaccggcggtctggatgacacgcagctgcgtaatctggaaacgcgtctg
agctatctgcgcgagctggaagagagacgtcaggcgatcctcaagtccatttccgagcaa
ggcaaactcaccgatgatctggcgaaggccatcaacgccaccctaagcaaaaccgaactc
gaagacctctacctgccctacaaacctaaacgccgcacccgcgggcaaatcgccattgaa
gcagggcttgagccgttggctgacctgctgtggagcgatccgtcacacacgccagaagtc
gccgctgcacaatatgtttatgccgataaaggcgtggcagataccaaagccgcgctggat
ggcgcgcgctatatcctgatggaacggtttgccgaagatgccgcgctgctggcgaaagtg
cgtgattatctgtggaagaacgcgcatttggtttctacggtggtgagcggtaaagaagag
gaaggggcgaaattccgcgactatttcgatcatcacgaaccgttgtccacggtgccttct
caccgcgcgctggcgatgttccgtgggcgtaacgaaggcgtacttcagctttcgctgaat
gccgatccacagttcgatgagccgcccaaagagagctattgcgagcaaatcatcatggat
caccttggcctgcgcctgaacaatgccccggcggatagctggcgcaaaggcgtggtgagc
tggacgtggcgcatcaaggtgctgatgcatctggaaaccgaactgatgggcaccgtgcgc
gaacgtgcggaagatgaagcaatcaacgtctttgcccgtaacctgcacgatctgctgatg
gcggcccctgccggactgcgtgcaacgatgggcctcgatccgggtctgcgtactggggta
aaagtggcggtggtcgatgccactggcaaactggtggcgaccgacaccatttacccgcac
accggacaggccgcaaaagcagcgatgaccgttgctgcgctgtgtgaaaaacataacgtt
gaactggtagcgatcggtaacggtacagcttcccgcgaaactgagcgtttctatctcgat
gtgcagaagcagttcccgaaagtgaccgcgcagaaagtaatcgtcagcgaagcaggcgcg
tcggtttactcggcttccgagctggctgcacaggagttcccggatctcgacgtttcgctg
cgtggcgcggtgtctatcgcccgccgtttgcaggatccgctggcggagctggtgaaaatc
gatccgaaatctatcggcgtaggtcagtatcagcatgacgtcagccagacgcaactggcc
cgcaaactggacgcagtagtagaagactgcgtaaacgccgttggcgtcgatctcaacact
gcttctgttccgctgttaacccgcgtggcgggcctgacgcgcatgatggcgcaaaacatc
gttgcctggcgcgatgagaacggtcagttccagaaccgtcagcaactgttaaaagtgagc
cgtctggggccgaaagccttcgagcagtgcgcgggcttcttgcgcattaaccacggtgat
aacccgctggacgcgtctaccgttcacccggaagcctatccggtggtggaacgcattctg
gcagcaacacagcaggcactgaaagatctgatgggtaacagcagcgaactgcgtaacctg
aaagcgtctgactttactgatgagaaattcggtgtgccgacggtaaccgacatcatcaaa
gagctggaaaaaccgggtcgcgatccgcgtccggaatttaaaaccgctcagtttgccgat
ggcgtcgagacaatgaacgacctgcaaccgggtatgatcctcgaaggcgcagtgaccaac
gtcaccaactttggcgcgtttgtcgatattggcgtgcatcaggacggcctggttcacatc
tcttcattgtcgaacaagtttgtggaagatccgcataccgtggtgaaagcgggcgacatt
gtgaaggtgaaagtgctggaagtggatcttcagcgtaaacgtatcgccctgactatgcgc
ctggatgagcagcctggcgaaaccaacgctcgtcgcggcggcggtaatgaacgcccgcaa
aacaaccgcccggcagccaaaccacgcggtcgtgaagcgcagcctgccggtaatagcgcg
atgatggatgcgctggcggcggcaatgggcaaaaaacgttaa
DBGET
integrated database retrieval system
