Escherichia coli DH1: EcDH1_0958
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Entry
EcDH1_0958 CDS
T01996
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
edh
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
edh03000
]
EcDH1_0958
Transcription factors [BR:
edh03000
]
Prokaryotic type
Helix-turn-helix
Other families
EcDH1_0958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_3
GAF_2
AAA_5
AAA
HTH_8
AAA_2
AAA_16
Mg_chelatase
AAA_19
AAA_7
HTH_50
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACX38641
LinkDB
All DBs
Position
complement(1027347..1029425)
Genome browser
AA seq
692 aa
AA seq
DB search
MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALADNAAIVLWQAQTQRAS
YYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFCETWPQLDAGGLYPKFGHY
CLMPLAAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIVSVVTEQIQSRVVNNVDYELL
CRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYST
HYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFDTWGNQIQTL
CLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERL
VDENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIAR
AIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLD
EVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYY
RLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRE
LENVIERAVLLTRGNVLQLSLPDIVLPEPETPPAATVVALEGEDEYQLIVRVLKETNGVV
AGPKGAAQRLGLKRTTLLSRMKRLGIDKSALI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatacaccgatgagtgatctcggacaacaagggttgttcgacatcactcggaca
ctattgcagcagcccgatctggcctcgctgtgtgaggctctttcgcaactggtaaagcgt
tctgcgctcgccgacaacgcggctattgtgttgtggcaagcgcagactcaacgtgcgtct
tattacgcgtcgcgtgaaaaagacacccccattaaatatgaagacgaaactgttctggca
cacggtccggtacgcagcattttgtcgcgccctgatacgctgcattgcagttacgaagaa
ttttgtgaaacctggccgcagctggacgcaggtgggctatacccaaaatttggtcactat
tgcctgatgccactggcggcggaagggcatatttttggtggctgtgaatttattcgttat
gacgatcgcccctggagcgaaaaagagttcaatcgtctgcaaacatttacgcagatcgtt
tctgtcgtcaccgaacaaatccagagccgcgtcgttaacaatgtcgactatgagttgtta
tgccgggaacgcgataacttccgcatcctggtcgccatcaccaacgcggtgctttcccgc
ctggatatggacgaactggtcagcgaagtcgccaaagaaatccattactatttcgacatt
gacgatatcagtatcgtcttacgcagccaccgtaaaaacaaactcaacatctactccact
cactatcttgataaacagcatcccgcccacgaacagagcgaagtcgatgaagccggaacc
ctcaccgaacgcgtgttcaaaagtaaagagatgctgctgatcaatctccacgagcgggac
gatttagccccctatgaacgcatgttgttcgacacctggggcaaccagattcaaaccttg
tgcctgttaccgctgatgtctggcgacaccatgctgggcgtgctgaaactggcgcaatgc
gaagagaaagtgtttaccactaccaatctgaatttactgcgccagattgccgaacgtgtg
gcaatcgctgtcgataacgccctcgcctatcaggaaatccatcgtctgaaagaacggctg
gttgatgaaaacctcgccctgaccgagcagctcaacaatgttgatagtgaatttggcgag
attattggccgcagcgaagccatgtacagcgtgcttaaacaagttgaaatggtggcgcaa
agtgacagtaccgtgctgatcctcggtgaaactggcacgggtaaagagctgattgcccgt
gcgatccataatctcagtgggcgtaataatcgccgcatggtcaaaatgaactgcgcggcg
atgcctgccggattgctggaaagcgatctgtttggtcatgagcgtggggcttttaccggt
gccagcgcccagcgtatcggtcgttttgaactggcggataaaagctccctgttcctcgac
gaagtgggcgatatgccactggagttacagccgaagttgctgcgtgtattgcaggaacag
gagtttgaacgtctcggcagcaacaaaatcattcagacggacgtgcgtctaatcgccgcg
actaaccgcgatctgaaaaaaatggtcgccgaccgtgagttccgtagcgatctctattac
cgcctgaacgtattcccgattcacctgccgccactacgcgagcgtccggaagatattccg
ctgctggcgaaagcctttaccttcaaaattgcccgtcgtctggggcgcaatatcgacagc
attcctgccgagacgctgcgcaccttgagcaacatggagtggccgggtaacgtacgcgaa
ctggaaaacgtcattgagcgcgcggtattgctaacacgcggtaacgtgctgcagctgtca
ttgccagatattgttttaccggaacctgaaacgccgcctgccgcaacggttgtcgccctg
gagggcgaagatgaatatcagttgattgtgcgcgtgctgaaagaaaccaacggcgtggtt
gccgggcctaaaggcgctgcgcaacgtctggggctgaaacgcacgaccctgctgtcacgg
atgaagcggctgggaattgataaatcggcattgatttaa
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