Escherichia coli DH1: EcDH1_1004
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Entry
EcDH1_1004 CDS
T01996
Name
(GenBank) Substrate-binding region of ABC-type glycine betaine transport system
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
edh
Escherichia coli DH1
Pathway
edh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EcDH1_1004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
edh02000
]
EcDH1_1004
Transporters [BR:
edh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
EcDH1_1004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
ACX38685
LinkDB
All DBs
Position
complement(1075638..1076630)
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AA seq
330 aa
AA seq
DB search
MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVN
KPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLID
KKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAAYELTNTV
THNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNA
DTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASE
GDIQGHVDGWIKAHQQQFDGWVNEALAAQK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatagcgtactttttgcgacagcgtttgccacgcttatctctacacaaactttt
gctgccgatctgccgggcaaaggcattactgttaatccagttcagagcaccatcactgaa
gaaaccttccagacgctgctggtcagtcgtgcgctggagaaattaggttataccgtcaac
aaacccagcgaagtagattacaacgttggctacacctcgcttgcttccggcgatgcaacc
ttcaccgccgtgaactggacgccactgcatgacaacatgtacgaagctgccggtggcgat
aagaaattttatcgtgaaggggtatttgttaacggcgcggcacagggttacctgatcgat
aagaaaaccgccgaccagtacaaaatcaccaacatcgcacaactgaaagatccgaagatc
gccaaactgttcgataccaacggcgacggaaaagcggatttaaccggttgtaaccctggc
tggggctgcgaaggtgcgatcaaccaccagcttgccgcgtatgaactgaccaacaccgtg
acgcataatcaggggaactacgcagcgatgatggccgacaccatcagtcgctacaaagag
ggcaaaccggtgttttattacacctggacgccgtactgggtgagtaacgaactgaagccg
ggcaaagatgtcgtctggttgcaggtgccgttctccgcactgccgggcgataaaaacgcc
gataccaaactgccgaatggtgcgaattatggcttcccggtcagcaccatgcatatcgtt
gccaacaaagcctgggccgagaaaaacccggcagcagcgaaactgtttgccattatgcag
ttgccagtggcagatattaacgcccagaacgccattatgcatgacggcaaagcctcagaa
ggcgatattcagggacacgttgatggttggatcaaagcccaccagcagcagttcgatggc
tgggtgaatgaggcgctggcagcgcagaagtaa
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