Escherichia coli DH1: EcDH1_1389
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Entry
EcDH1_1389 CDS
T01996
Name
(GenBank) ribonuclease BN
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
edh
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
edh03016
]
EcDH1_1389
Enzymes [BR:
edh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EcDH1_1389
Transfer RNA biogenesis [BR:
edh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EcDH1_1389
Prokaryotic type
EcDH1_1389
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ACX39061
LinkDB
All DBs
Position
complement(1494447..1495382)
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AA seq
311 aa
AA seq
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MKRDELMELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNP
GKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDY
PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPL
FQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEAT
LDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPAT
ELANDFTVFNV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgtgatgaactcatggaattaatttttttaggtacttcagccggtgtgccaacc
cgcacgcgcaatgtcacggcaatattgcttaacctgcaacatccgacccagagcggactt
tggttgtttgactgcggtgaaggcacccagcatcagctactgcataccgcctttaaccct
ggaaaactggacaagatttttatcagtcaccttcatggcgatcatctttttggtttaccc
ggcttgctgtgcagtcgttctatgtcaggcattatccaacccttaacgatttatggtccg
caaggtatccgtgaatttgtggaaaccgcgctgcggattagcggctcatggaccgattat
ccgctggaaattgtcgaaattggcgctggcgaaattctcgatgatggcctgcgcaaagta
accgcttatccgctggaacacccactggaatgttatggctatcgtattgaagaacatgat
aaaccgggtgcattaaatgcccaggcattaaaagctgctggcgtgccgcctggcccactg
tttcaggaattaaaagcgggcaaaacaatcacgctggaagatggaaggcagattaacggc
gcagattacttagctgctccagtgccaggtaaagcgctcgctattttcggcgataccggc
ccctgcgatgccgcacttgacctggctaaaggtgtcgatgtcatggtgcacgaagcgacg
ctggatataaccatggaagccaaagccaatagtcgcggccatagctctacacgccaggct
gcgacactagcccgtgaggctggagtcggcaagctaatcattacccacgtcagctcgcgc
tatgatgacaaaggttgtcagcacctgttacgtgaatgcaggtcaattttcccggcgact
gaactggcgaatgatttcaccgtgtttaacgtttaa
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