Escherichia coli DH1: EcDH1_1590
Help
Entry
EcDH1_1590 CDS
T01996
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
KO
K21084
diguanylate cyclase [EC:
2.7.7.65
]
Organism
edh
Escherichia coli DH1
Pathway
edh02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
EcDH1_1590
Enzymes [BR:
edh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
EcDH1_1590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
MASE1
PAS_3
PAS_4
PAS
PAS_9
EAL
PAS_8
Motif
Other DBs
NCBI-ProteinID:
ACX39255
LinkDB
All DBs
Position
complement(1731473..1734790)
Genome browser
AA seq
1105 aa
AA seq
DB search
MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH
AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN
LADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH
YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL
TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES
ETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL
QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT
EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL
PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM
TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL
LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG
SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID
LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI
ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV
TVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCE
GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLV
NDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKA
NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD
LIYGEVIADAQPLDLLVNSSYFAIN
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacaatcacagcatgtattaattgccctgccccacccgctgcttcacctggtc
agtttaggtttagtctcgtttatctttacccttttctcgcttgagctttcgcagtttggc
acccaactcgccccactgtggttcccgacgtccatcatgatggtggcgttttatcgccat
gccgggcgcatgtggccgggaattgcgctgagctgttcgctgggaaatatcgccgcatcc
atcctgcttttttccaccagctcgctgaacatgacctggacgaccatcaatattgttgaa
gccgtggtcggggcagtgctgctacgtaaattgctgccgtggtataaccccttgcaaaat
ctggctgactggctgcgtctggcactcggcagcgccattgttccgcctctgttggggggt
gttctggttgtcctgctgacgcccggagacgatcctctcagggcatttttgatatgggta
ctgtcagaatccatcggcgctctggcactggtgccgctgggattgttatttaaaccacac
tatctgctgcgccatcgcaacccacggttgctttttgagtcgctgctcacgttagccatc
acactgacgttaagctggctttcgatgctgtatctgccgtggccttttactttcattatt
gtgctgttgatgtggagcgccgtgcgtctgccacgaatggaagcctttttgatcttcctt
accacggtgatgatggtgtcgctgatgatggccgcggatccctccctgcttgctacgccg
cgtacgtacctgatgagccatatgccgtggctaccgtttttgctgatcctgctgcccgcc
aacatcatgaccatggtgatgtatgcctttcgtgcggaacgcaaacacatttccgaaagc
gaaacccactttcggaacgcgatggaatattccgctatcggtatggcgttagtgggcacc
gagggacaatggctgcaaaccaacaaagcgctctgccagtttctcgggtacagtcaggaa
gagctgcgcggactcacctttcagcaactgacctggccggaggatctcaataaagatctc
caacaggttgaaaagctgataagcggtgaaataaacacctattcaatggaaaaacgctac
tacaaccgcaatggcgatgttgtctgggcgttgcttgccgtctcactggtgcgccacacg
gatggcacgccgctctattttatcgctcagattgaagacattaacgagctaaaacgcacc
gaacaggtcaatcagcaactgatggagcgcatcactctggctaacgaagcgggcgggatt
ggcatctgggagtgggagttgaagccgaatatttttagctgggataagcggatgttcgag
ctgtatgaaattcctccacatatcaaaccgaactggcaggtgtggtacgagtgcgtgctg
ccggaagatcgccagcatgccgaaaaagtgattcgtgattcgttgcaatcacgctcgccc
tttaaactggaatttcgcattaccgtaaaagacggtattcgccatatccgcgccctcgcc
aaccgggtactgaataaagaaggcgaagtcgaacgtctcctcggcatcaatatggatatg
accgaagtgaaacagcttaacgaggcattgtttcaggaaaaagagcgcctgcacattacg
cttgattccatcggtgaagccgtggtctgtattgatatggcgatgaaaattacctttatg
aatccagtggcggagaagatgagcggctggacgcaggaagaagcgttaggtgttccgctc
ctgacggtgttgcatattacttttggcgacaacggaccattaatggagaacatttacagt
gccgacacctcacgttccgcgatcgagcaagatgtggtgttgcactgtcggagcggcggc
agttacgacgtgcattacagtattacgccgttaagtactctggacggcagcaatattggt
tcggttctggtgattcaggacgttaccgaatcacgcaaaatgctgcgccagctgagctac
agcgcctcccatgatgcactgacgcatctcgccaaccgcgccagttttgagaaacaactg
cgtatcctgctgcaaacggtaaacagtacacatcagcgacatgccctggtgtttatcgat
cttgatcgctttaaagcggtgaatgacagcgccgggcatgcggcgggtgacgctttgctg
cgcgaactggcgtcgttaatgctgagtatgctgcgttccagcgacgtgctggcgcgactc
ggtggggatgaatttggtctgctgctaccagactgtaatgttgaaagcgcgcgttttatc
gctacacgcattatcagtgccgtgaatgactatcactttatatgggaaggccgtgtgcat
cgggtaggtgccagtgccgggattaccttgattgatgacaacaatcatcaggcggcagaa
gtgatgtcgcaggctgatatcgcctgttatgcctccaaaaatggtggccggggccgggtg
acggtttacgaaccgcagcaagctgccgcacatagcgaacgggcggcgatgtcgcttgat
gaacagtggcggatgattaaagagaatcagttgatgatgctcgcccacggtgtcgcttcg
ccacggatcccggaagcgcgtaatttgtggctgatttcacttaagctctggagttgcgaa
ggcgagattattgatgaacaaacatttcgtcgtagcttcagcgatccggcgcttagccat
gctcttgaccgccgggtattccacgaatttttccagcaggccgcaaaagcggttgccagt
aaaggcataagcatctccctccccctttccgttgccggtttgagtagcgccacgctggtg
aatgatctgcttgagcagctggaaaatagccctctaccaccacggttattacatctgatt
attccggctgaagcgattttagatcacgcagaaagcgtgcaaaaactgcggctggcggga
tgtcggatagtgctcagccaggtgggccgcgatctgcaaatcttcaactcgctgaaagcg
aatatggcagattacctgctacttgatggtgagttatgcgccaacgtgcagggtaatttg
atggatgagatgctgattacgattattcaggggcacgctcagcgactcgggatgaaaacc
atcgccgggccagtcgttttacccttagtgatggatacgctttctggcatcggcgtcgat
ctgatttatggtgaggtgattgccgatgcccaaccgctggatttgctggtgaatagtagt
tatttcgcgattaactga
DBGET
integrated database retrieval system
