Escherichia coli DH1: EcDH1_1838
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Entry
EcDH1_1838 CDS
T01996
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
edh
Escherichia coli DH1
Pathway
edh00061
Fatty acid biosynthesis
edh00071
Fatty acid degradation
edh01100
Metabolic pathways
edh01212
Fatty acid metabolism
edh02024
Quorum sensing
Module
edh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EcDH1_1838
00071 Fatty acid degradation
EcDH1_1838
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EcDH1_1838
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
edh01004
]
EcDH1_1838
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
edh04147
]
EcDH1_1838
Enzymes [BR:
edh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EcDH1_1838
Lipid biosynthesis proteins [BR:
edh01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
EcDH1_1838
Exosome [BR:
edh04147
]
Exosomal proteins
Exosomal proteins of breast milk
EcDH1_1838
Exosomal proteins of breast cancer cells
EcDH1_1838
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ACX39496
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Position
1988666..1990417
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AA seq
583 aa
AA seq
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MLTACISFGVAMTTNTHFRGEELKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYAD
QPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAG
MIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLST
AKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT
GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQ
NLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQ
QVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNE
VPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMI
LVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCR
RQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttaacggcatgtatatcatttggggttgcgatgacgacgaacacgcattttagaggt
gaagaattgaagaaggtttggcttaaccgttatcccgcggacgttccgacggagatcaac
cctgaccgttatcaatctctggtagatatgtttgagcagtcggtcgcgcgctacgccgat
caacctgcgtttgtgaatatgggggaggtaatgaccttccgcaagctggaagaacgcagt
cgcgcgtttgccgcttatttgcaacaagggttggggctgaagaaaggcgatcgcgttgcg
ttgatgatgcctaatttattgcaatatccggtggcgctgtttggcattttgcgtgccggg
atgatcgtcgtaaacgttaacccgttgtataccccgcgtgagcttgagcatcagcttaac
gatagcggcgcatcggcgattgttatcgtgtctaactttgctcacacactggaaaaagtg
gttgataaaaccgccgttcagcacgtaattctgacccgtatgggcgatcagctatctacg
gcaaaaggcacggtagtcaatttcgttgttaaatacatcaagcgtttggtgccgaaatac
catctgccagatgccatttcatttcgtagcgcactgcataacggctaccggatgcagtac
gtcaaacccgaactggtgccggaagatttagcttttctgcaatacaccggcggcaccact
ggtgtggcgaaaggcgcgatgctgactcaccgcaatatgctggcgaacctggaacaggtt
aacgcgacctatggtccgctgttgcatccgggcaaagagctggtggtgacggcgctgccg
ctgtatcacatttttgccctgaccattaactgcctgctgtttatcgaactgggtgggcag
aacctgcttatcactaacccgcgcgatattccagggttggtaaaagagttagcgaaatat
ccgtttaccgctatcacgggcgttaacaccttgttcaatgcgttgctgaacaataaagag
ttccagcagctggatttctccagtctgcatctttccgcaggcggtgggatgccagtgcag
caagtggtggcagagcgttgggtgaaactgaccggacagtatctgctggaaggctatggc
cttaccgagtgtgcgccgctggtcagcgttaacccatatgatattgattatcatagtggt
agcatcggtttgccggtgccgtcgacggaagccaaactggtggatgatgatgataatgaa
gtaccaccaggtcaaccgggtgagctttgtgtcaaaggaccgcaggtgatgctgggttac
tggcagcgtcccgatgctaccgatgaaatcatcaaaaatggctggttacacaccggcgac
atcgcggtaatggatgaagaaggattcctgcgcattgtcgatcgtaaaaaagacatgatt
ctggtttccggttttaacgtctatcccaacgagattgaagatgtcgtcatgcagcatcct
ggcgtacaggaagtcgcggctgttggcgtaccttccggctccagtggtgaagcggtgaaa
atcttcgtagtgaaaaaagatccatcgcttaccgaagagtcactggtgactttttgccgc
cgtcagctcacgggatacaaagtaccgaagctggtggagtttcgtgatgagttaccgaaa
tctaacgtcggaaaaattttgcgacgagaattacgtgacgaagcgcgcggcaaagtggac
aataaagcctga
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