Escherichia coli DH1: EcDH1_2163
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Entry
EcDH1_2163 CDS
T01996
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
edh
Escherichia coli DH1
Pathway
edh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EcDH1_2163
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
edh02000
]
EcDH1_2163
Transporters [BR:
edh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EcDH1_2163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_16
AAA_22
AAA_33
AAA_29
GvpO
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACX39815
LinkDB
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Position
2319461..2320447
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AA seq
328 aa
AA seq
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MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLP
TGSYCVHRGQISLLGEDVLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIR
HHQPISRREARAKAIDLLEEMQIPDAVEVMSRYPFELSGGMRQRVMIALAFSCEPQLIIA
DEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMAVVSQLCDSVYVMYAGSVIESGV
TADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGTVPNLTHLPDGCAFRDRCYAAGAQC
ENVPALTACGDNNQRCACWYPQQEVISV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacccgttctggacattcaacaactgcatttgagtttccccggttttaacggt
gatgttcacgcgctcaacaatgtgtccttgcagattaaccgcggtgaaattgtcggtctg
gtgggagaatccggctcaggtaaatcagtcaccgcaatgctgattatgcgtctgctaccg
acgggcagttattgcgtacatcgggggcagatttccctgctgggagaagatgttcttaac
gcgcgggaaaaacagcttcgtcagtggcgcggcgcacgagtggcgatgatctttcaggaa
ccgatgaccgccctcaatccgacacgtcgaataggtcttcagatgatggacgtgatccgc
catcatcaaccaataagtcgtcgggaagccagagctaaagcgattgacctgctggaagag
atgcaaatcccggatgccgtggaagttatgtcgcgctatccgtttgagctttcaggtggt
atgcgccagcgggtaatgattgcgctggcattctcctgcgagccgcaattgattattgcc
gacgaaccgactacggcgctggacgtcacggtgcagttgcaggtactgcgtttgcttaaa
cataaagcccgcgccagtggaactgcggttctgttcatcagccatgatatggccgtggtg
tcgcaactgtgcgatagcgtttacgtgatgtatgccggaagcgtaattgaaagcggcgtg
acggcagacgttatccatcatccccggcatccgtataccattggtttgctgcaatgcgca
ccagaacatggagtaccacgccagctattacccgccattccagggacggtaccaaacctc
acccatttgcctgacggctgcgcttttcgcgatcgttgctatgcggcaggtgcacagtgt
gaaaacgtcccggcgctgacagcgtgtggtgacaacaaccagcgctgtgcctgttggtat
ccgcagcaggaggttataagtgtctga
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