Escherichia coli DH1: EcDH1_2274
Help
Entry
EcDH1_2274 CDS
T01996
Name
(GenBank) Prophage tail fibre domain protein
Organism
edh
Escherichia coli DH1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
phage_tail_N
Gp34_trimer
Collar
Phage_fiber
Motif
Other DBs
NCBI-ProteinID:
ACX39921
LinkDB
All DBs
Position
complement(2446067..2449429)
Genome browser
AA seq
1120 aa
AA seq
DB search
MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSV
ILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFELMVEEVARNASAV
AQNTAAAKKSASDASTSAREAATHAADAADSARAASTSAGQAASSAQSASSSAGTASTKA
TEASKSAAAAESSKSAAATSAGAAKTSETNASASLQSAATSASTATTKASEAATSARDAA
ASKEAAKSSETNASSSASSAASSATAAGNSAKAAKTSETNARSSETAAGQSASAAAGSKT
AAASSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEATEQASAAARSASAAKT
SETNAKASETSAESSKTAAASSASSAASSASSASASKDEATRQASAAKSSATTASTKATE
AAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNSTSE
TLAATPKAVKSAYDNAEKRLQKDQNGADIPDKGCFLNNINAVSKTDFADKRGMRYVRVNA
PAGATSGKYYPVVVMRSAGSVSELASRVIITTATRTAGDPMNNCEFNGFVMPGGWTDRGR
YAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDGLSISAPGADLVV
NDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKLFATDEIVARGGN
QIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGELVIGTKLSASLN
GNALTATKLQTPRRVSGVEFDGSKDITLTAAHVAAFARRATDTYADADGGVPWNAESGAY
NVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLP
PESYPVGAPIPWPSDTVPSGYALMQGQAFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPAS
GRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGSTNSAGA
HTHSLANVNTASANSGAGSASTRLSVVHNQNYATSSAGAHTHSLSGTAASAGAHAHTVGI
GAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaagatttcaggtgtactgaaagacggcacaggaaaaccggtacagaactgc
acaatccagctgaaagcaaaacgtaacagcaccacggtggtggtgaacacgctggcctca
gaaaatccggatgaagccgggcgttacagcatggacgttgagtacggtcagtacagcgtt
attctgttggtggaaggattcccgccgtcacatgccgggaccattaccgtgtatgaagat
tctcaacccggtacgctgaatgattttctcggtgccatgacggaggatgatgcccgtccg
gaggcactgcgccgttttgaactgatggtggaagaggtggcgcgtaacgcgtccgcggtg
gcacagaacacggcagccgcgaagaagtcagccagtgatgccagcacatcagcccgtgag
gcggcaacccatgcggctgatgctgcggactcagcacgcgcagccagcacgtcagccgga
caggccgcgtcgtcggctcagtcagcgtcttccagcgcaggaacggcatcaacaaaggcc
actgaagcatcaaaaagtgctgccgctgcagagtcctcaaaaagcgcggcggccaccagt
gccggtgcggcgaaaacgtcagaaacgaatgcttcagcgtcactacaatcagcagccaca
tctgcatccaccgcgaccacgaaggcatcagaagctgcgacctcggcccgggatgcggcg
gcctcaaaagaagcggcaaaatcatcagaaacgaacgcatcatcaagcgccagtagtgca
gcttcctcggcaacggcggcaggaaattccgcgaaggcggcaaaaacgtccgagacgaac
gccaggtcttctgaaacggcagcgggacagagcgcctcggctgcggcaggctcaaaaaca
gcggctgcgtcgtctgccagtgcagcgtcaacaagtgccgggcaggcctcagccagtgcc
accgccgccggaaaatcggcagaaagcgccgcatcgtctgcttcaacagccacaacgaag
gctggcgaagccactgaacaggccagcgcagcagcgaggtctgcttccgcagcgaagaca
tccgaaacgaacgcgaaagcgtcggaaacaagcgcagaatcctcaaaaacggctgccgca
tcgtcagccagttcggcggcgtcatcggcatcatcggcgtctgcttcaaaagatgaggcg
accagacaagcgtcagcagcgaagagcagcgccacgacggcatccacgaaggcgacagag
gctgctggcagtgcgacggcggcagctcagagcaaaagtacggcggaatccgcggcaacg
cgcgccgagacagcagctaaacgggcagaggatattgcatccgccgtggcgcttgaggat
gcaagtacgacgaaaaaggggatagtacagctcagcagtgcgaccaacagtacgtctgaa
acgctggcggcaacgccaaaggcagtaaaatcagcctatgacaatgcagagaaacgtctg
cagaaagaccagaacggcgctgatatacccgataagggatgcttcctgaacaacattaac
gcggtcagtaaaacagactttgctgataagcgtggtatgcgttatgtgcgggttaacgct
cctgcaggtgcaacatctggaaaatattaccctgttgttgttatgcgttctgctggctca
gtaagcgaactggcatcaagagtcattatcaccacggcaacgcgaaccgcaggcgatccg
atgaataactgcgagtttaacggatttgttatgcctggtggctggactgacagggggcgt
tatgcttatggcatgttctggcaatatcaaaacaatgaacgagccattcactcaataatg
atgagtaataagggcgatgatttgcgctctgtgttctatgttgatggcgctgctttccct
gtttttgcgtttattgaagatggcctgtcaatatccgcacctggtgctgatctcgttgtt
aatgatacgacctataagtttggggcaacaaatccggcgactgaatgtatcgcggcggac
gttatccttgattttaagagtgggcgtggtttttatgagtctcattcgttaatcgttaac
gataacttgtcgtgcaaaaaactttttgccacagacgaaattgtagcgcgtggtggtaat
cagattcgaatgataggtggggagtatggtgcattatggcgtaatgatggcgctaaaact
tacctgctgcttaccaatcaaggtgatgtttatggtggctggaatacattaagaccgttt
gctattgataacgcaaccggcgaactggttattggaaccaaactgtccgcaagtctgaac
ggtaatgcattaacagcaacaaagctgcaaacgccaagacgggtttctggtgttgagttt
gatggttccaaagatattactttaaccgccgcgcatgtggctgcttttgccagaagggca
acggatacatatgccgatgcggatggtggcgttccatggaatgccgaatctggcgcttac
aatgtcacccgctctggcgacagctatattctggttaacttctataccggagtcggaagt
tgccggaccctgcagatgaaggcgcattacagaaatggtggtctgttctaccgttcttca
agagacggttatggttttgaggaagactgggcagaagtttatacctcgaaaaatcttcca
ccagaaagctacccagtcggcgcaccaatcccgtggccatcagataccgttccgtctggt
tatgccctgatgcaggggcaggcttttgacaaatctgcttacccgaaacttgcagccgct
tatccgtcaggcgtgatccctgatatgcgtggctggacgattaagggcaaacctgccagt
ggtcgggccgtattgtctcaggaacaggacggcattaaatcgcatacccacagcgccagc
gcatccagtacagatttggggacgaaaaccacatcgtcgtttgattacggcactaaatcc
acgaataacaccggggcacatacacacagtgtgagcggctctacaaactcggctggagca
cacacacactcactagccaacgtgaacacggctagtgctaactccggtgctggtagtgca
tcaacaagattgtctgttgtgcataatcaaaactatgcaacatcatctgctggcgcacat
acccactcactgtccggcactgctgcaagcgcaggtgcacacgcgcatactgtcggtatt
ggtgctcatacgcactccgttgcgattggttcacatggacacaccatcaccgttaacgct
gctggtaacgcggaaaacaccgtcaaaaacatcgcatttaactatattgtgaggcttgca
taa
DBGET
integrated database retrieval system
