Escherichia coli DH1: EcDH1_2961
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Entry
EcDH1_2961 CDS
T01996
Name
(GenBank) ROK familiy protein
KO
K02565
N-acetylglucosamine repressor
Organism
edh
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
edh03000
]
EcDH1_2961
Transcription factors [BR:
edh03000
]
Prokaryotic type
Other transcription factors
Others
EcDH1_2961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
MarR
HTH_24
Fe_dep_repress
MarR_2
HTH_Crp_2
HTH_IclR
Rrf2
TrmB
SMC_ScpB
FeoC
Motif
Other DBs
NCBI-ProteinID:
ACX40590
LinkDB
All DBs
Position
3179525..3180745
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AA seq
406 aa
AA seq
DB search
MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQLAPASVTKITRQLIERG
LIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITLFDLSSKVLAEEHYPLPER
TQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVE
ALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNG
NVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDCTIKTI
CKAANKGDSLASEVIEYVGRHLGKTIAIAINLFNPQKIVIAGEITEADKVLLPAIESCIN
TQALKAFRTNLPVVRSELDHRSAIGAFALVKRAMLNGILLQHLLEN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaggcggacaagctcagataggtaatgttgatctcgtaaaacagcttaacagc
gcggcggtttatcgcctgattgaccagtacgggccaatctcgcggattcagattgccgag
caaagccagcttgcccccgccagcgtaaccaaaattacgcgtcagcttatcgaacgcggg
ctgatcaaagaagttgatcagcaggcctccaccgggggccgccgcgctatctccatcgtc
accgaaacccgcaatttccacgcaatcggcgtacggcttggtcgtcatgacgccaccatc
actctgtttgatctcagcagcaaagtgctggcagaagaacattacccgctgccggaacgt
acccagcaaacgctggaacatgccctgttgaatgccattgctcagtttattgatagctac
cagcgcaaactgcgcgagctgatcgcgatttcggtgatcctgccagggcttgttgacccg
gacagcggcaaaattcattacatgccgcatattcaggtagaaaactgggggctggtagaa
gctctggaagaacgttttaaagtgacctgtttcgttggtcacgatatccgtagtctggcg
ctggcggagcactacttcggtgcaagtcaggattgcgaagactccattctggtgcgtgtc
catcgcggaaccggggccgggattatctctaacgggcgcatttttattggccgcaacggc
aacgtcggtgaaattggccatattcaggtcgaaccgctgggtgaacgctgccactgcggc
aactttggctgcctggaaactatcgctgccaacgctgccattgaacaacgggtgttgaat
ctgttaaagcagggctaccagagccgcgtgccgctggacgactgcaccatcaaaactatc
tgcaaagccgcgaacaaaggcgatagtctggcgtcggaagtaattgagtatgtcggtcgt
catctgggtaaaaccatcgccattgctatcaacttatttaatccgcaaaaaattgttatt
gccggtgaaatcaccgaagccgataaagtgctgctccctgctattgaaagctgcattaat
acccaggcgctgaaggcgtttcgcactaatctgccggtggtacgttctgagctggatcac
cgctcggcaatcggcgcttttgcgctggtaaaacgcgccatgctcaacggtattttgctc
cagcatttgctggaaaattaa
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