Escherichia coli DH1: EcDH1_3065
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Entry
EcDH1_3065 CDS
T01996
Name
(GenBank) transcriptional regulator, AraC family
KO
K07780
AraC family transcriptional regulator, transcriptional regulator required for anaerobic and stationary phase induction of genes
Organism
edh
Escherichia coli DH1
Pathway
edh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EcDH1_3065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
edh03000
]
EcDH1_3065
Transcription factors [BR:
edh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EcDH1_3065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HSD_C
AMOP
Motif
Other DBs
NCBI-ProteinID:
ACX40693
LinkDB
All DBs
Position
complement(3296689..3297438)
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AA seq
249 aa
AA seq
DB search
MDYVCSVVFICQSFDLIINRRVISFKKNSLFIVSDKIRRELPVCPSKLRIVDIDKKTCLS
FFIDVNNELPGKFTLDKNGYIAEEEPPLSLVFSLFEGIKIADSHSLWLKERLCISLLAMF
KKRESVNSFILTNINTFTCKITGIISFNIERQWHLKDIAELIYTSESLIKKRLRDEGTSF
TEILRDTRMRYAKKLITSNSYSINVVAQKCGYNSTSYFICAFKDYYGVTPSHYFEKIIGV
TDGINKTID
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggattatgtttgctccgtagttttcatctgtcaatcatttgatttaattataaacagg
agagttatctcgttcaaaaaaaattcattgtttattgtaagcgacaaaattagaagggag
ttaccagtatgcccctctaaactaagaattgttgatatagataagaaaacatgtttatcc
ttttttatcgacgtgaataatgagctgcctggcaaatttactcttgataagaatggctat
attgctgaagaggaacctccattatcgcttgttttttctctgtttgaagggattaaaata
gcagactcacactccctttggttaaaagaaagactatgtatatccttacttgccatgttc
aaaaaacgcgaaagtgtaaattcatttatactaacaaatataaatacatttacctgtaaa
attactggaataatcagttttaatattgagcggcaatggcatttaaaagatattgcggaa
ttgatttatacgagtgaaagtttaataaaaaaaagattaagggatgaaggaacgtcattt
actgaaatattgagagatactaggatgaggtatgcaaaaaaactcataacttcaaactct
tattctatcaatgtcgtagcccagaaatgtggctataacagtacttcatatttcatatgt
gcatttaaagattattatggtgtcacgccatctcattattttgagaaaataatcggcgtc
acagatggaataaacaaaacaattgactga
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