Escherichia coli DH1: EcDH1_3169
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Entry
EcDH1_3169 CDS
T01996
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
edh
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
edh03032
]
EcDH1_3169
03036 Chromosome and associated proteins [BR:
edh03036
]
EcDH1_3169
03400 DNA repair and recombination proteins [BR:
edh03400
]
EcDH1_3169
DNA replication proteins [BR:
edh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EcDH1_3169
Chromosome and associated proteins [BR:
edh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EcDH1_3169
DNA repair and recombination proteins [BR:
edh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EcDH1_3169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ACX40795
LinkDB
All DBs
Position
complement(3409232..3409504)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcg
gctggccgtgcgttagatgctattattgcttccgtaactgaatctctgaaagaaggggat
gatgtagcactggtaggttttggtacttttgccgttaaagagcgtgctgcccgtactggc
cgcaacccgcagaccggtaaagagatcaccatcgctgctgctaaagtaccgagcttccgt
gcaggtaaagcactgaaagacgcggtaaactaa
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