Escherichia coli DH1: EcDH1_3187
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Entry
EcDH1_3187 CDS
T01996
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
edh
Escherichia coli DH1
Pathway
edh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EcDH1_3187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edh03400
]
EcDH1_3187
Enzymes [BR:
edh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
EcDH1_3187
DNA repair and recombination proteins [BR:
edh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EcDH1_3187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
DUF6687
Motif
Other DBs
NCBI-ProteinID:
ACX40813
LinkDB
All DBs
Position
3429612..3429854
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AA seq
80 aa
AA seq
DB search
MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRV
QILLSDNEDASLTPFTPDNE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaaaaatgaggcgcccgccagctttgaaaaggcgctgagcgagctggaacag
attgtaacccgtctggaaagtggcgacctgccgctggaagaggcgctgaacgagttcgaa
cgcggcgtgcagctggcacgtcaggggcaggccaaattacaacaagccgaacagcgcgta
caaattctgctgtctgacaatgaagacgcctctctaaccccttttacaccggacaatgag
taa
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