Escherichia coli DH1: EcDH1_3393
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Entry
EcDH1_3393 CDS
T01996
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
edh
Escherichia coli DH1
Pathway
edh03030
DNA replication
edh03430
Mismatch repair
edh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EcDH1_3393
03430 Mismatch repair
EcDH1_3393
03440 Homologous recombination
EcDH1_3393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
edh03032
]
EcDH1_3393
03400 DNA repair and recombination proteins [BR:
edh03400
]
EcDH1_3393
Enzymes [BR:
edh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EcDH1_3393
DNA replication proteins [BR:
edh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EcDH1_3393
DNA repair and recombination proteins [BR:
edh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EcDH1_3393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
ACX41010
LinkDB
All DBs
Position
complement(3634580..3635320)
Genome browser
AA seq
246 aa
AA seq
DB search
MTAMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRL
VDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRD
IPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLA
MTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFATDEEIAAHEARLDLVQKKGG
SCLWRA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctatgagcactgcaattacacgccagatcgttctcgataccgaaaccaccggt
atgaaccagattggtgcgcactatgaaggccacaagatcattgagattggtgccgttgaa
gtggtgaaccgtcgcctgacgggcaataacttccatgtttatctcaaacccgatcggctg
gtggatccggaagcctttggcgtacatggtattgccgatgaatttttgctcgataagccc
acgtttgccgaagtagccgatgagttcatggactatattcgcggcgcggagttggtgatc
cataacgcagcgttcgatatcggctttatggactacgagttttcgttgcttaagcgcgat
attccgaagaccaatactttctgtaaggtcaccgatagccttgcggtggcgaggaaaatg
tttcccggtaagcgcaacagcctcgatgcgttatgtgctcgctacgaaatagataacagt
aaacgaacgctgcacggggcattactcgatgcccagatccttgcggaagtttatctggcg
atgaccggtggtcaaacgtcgatggcttttgcgatggaaggagagacacaacagcaacaa
ggtgaagcaacaattcagcgcattgtacgtcaggcaagtaagttacgcgttgtttttgcg
acagatgaagagattgcagctcatgaagcccgtctcgatctggtgcagaagaaaggcgga
agttgcctctggcgagcataa
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