Escherichia coli DH1: EcDH1_3417
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Entry
EcDH1_3417 CDS
T01996
Name
(GenBank) Lysine decarboxylase
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
edh
Escherichia coli DH1
Pathway
edh00310
Lysine degradation
edh01100
Metabolic pathways
edh01110
Biosynthesis of secondary metabolites
edh01120
Microbial metabolism in diverse environments
Module
edh_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
EcDH1_3417
Enzymes [BR:
edh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
EcDH1_3417
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACX41033
LinkDB
All DBs
Position
complement(3659558..3661699)
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AA seq
713 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQY
TDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLI
DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVH
AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIF
ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDAD
ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH
DLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM
PGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattgccattatgggaccgcatggcgtcttttataaagatgagcccatcaaa
gaactggagtcggcgctggtggcgcaaggctttcagattatctggccacaaaacagcgtt
gatttgctgaaatttatcgagcataaccctcgaatttgcggcgtgatttttgactgggat
gagtacagtctcgatttatgtagcgatatcaatcagcttaatgaatatctcccgctttat
gccttcatcaacacccactcgacgatggatgtcagcgtgcaggatatgcggatggcgctc
tggttttttgaatatgcgctggggcaggcggaagatatcgccattcgtatgcgtcagtac
accgacgaatatcttgataacattacaccgccgttcacgaaagccttgtttacctacgtc
aaagagcggaagtacaccttttgtacgccggggcatatgggcggcaccgcatatcaaaaa
agcccggttggctgtctgttttatgattttttcggcgggaatactcttaaggctgatgtc
tctatttcggtcaccgagcttggttcgttgctcgaccacaccgggccacacctggaagcg
gaagagtacatcgcgcggacttttggcgcggaacagagttatatcgttaccaacggaaca
tcgacgtcgaacaaaattgtgggtatgtacgccgcgccatccggcagtacgctgttgatc
gaccgcaattgtcataaatcgctggcgcatctgttgatgatgaacgatgtagtgccagtc
tggctgaaaccgacgcgtaatgcgttggggattcttggtgggatcccgcgccgtgaattt
actcgcgacagcatcgaagagaaagtcgctgctaccacgcaagcacaatggccggttcat
gcggtgatcaccaactccacctatgatggcttgctctacaacaccgactggatcaaacag
acgctggatgtcccgtcgattcacttcgattctgcctgggtgccgtacacccattttcat
ccgatctaccagggtaaaagtggtatgagcggcgagcgtgttgcgggaaaagtgatcttc
gaaacgcaatcgacccacaaaatgctggcggcgttatcgcaggcttcgctgatccacatt
aaaggcgagtatgacgaagaggcctttaacgaagcctttatgatgcataccaccacctcg
cccagttatcccattgttgcttcggttgagacggcggcggcgatgctgcgtggtaatccg
ggcaaacggctgattaaccgttcagtagaacgagctctgcattttcgcaaagaggtccag
cggctgcgggaagagtctgacggttggtttttcgatatctggcaaccgccgcaggtggat
gaagccgaatgctggcccgttgcgcctggcgaacagtggcacggctttaacgatgcggat
gccgatcatatgtttctcgatccggttaaagtcactattttgacaccggggatggacgag
cagggcaatatgagcgaggaggggatcccggcggcgctggtagcaaaattcctcgacgaa
cgtgggatcgtagtagagaaaaccggcccttataacctgctgtttctctttagtattggc
atcgataaaaccaaagcaatgggattattgcgtgggttgacggaattcaaacgctcttac
gatctcaacctgcggatcaaaaatatgctacccgatctctatgcagaagatcccgatttc
taccgcaatatgcgtattcaggatctggcacaagggatccataagctgattcgtaaacac
gatcttcccggtttgatgttgcgggcattcgatactttgccggagatgatcatgacgcca
catcaggcatggcaacgacaaattaaaggcgaagtagaaaccattgcgctggaacaactg
gtcggtagagtatcggcaaatatgatcctgccttatccaccgggcgtaccgctgttgatg
cctggagaaatgctgaccaaagagagccgcacagtactcgattttctactgatgctttgt
tccgtcgggcaacattaccccggttttgaaacggatattcacggcgcgaaacaggacgaa
gacggcgtttaccgcgtacgagtcctaaaaatggcgggataa
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