Escherichia coli DH1: EcDH1_3609
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Entry
EcDH1_3609 CDS
T01996
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
edh
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edh03400
]
EcDH1_3609
DNA repair and recombination proteins [BR:
edh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EcDH1_3609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
Rad51
GvpD_P-loop
AAA_22
SLFN-g3_helicase
AAA_14
ABC_tran
AAA_16
nSTAND3
AAA_24
AAA
DUF7125
NTPase_1
cobW
Zeta_toxin
AAA_29
DZR
Zn_ribbon_Thio2
Viral_helicase1
AAA_5
AAA_30
Herpes_Helicase
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ACX41222
LinkDB
All DBs
Position
complement(3885735..3887117)
Genome browser
AA seq
460 aa
AA seq
DB search
MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPMVARNERLSGYAGSAGV
AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ
VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagctccaaaacgcgcctttgtttgtaatgaatgcggggccgattatccgcgc
tggcaggggcagtgcagtgcctgtcatgcctggaacaccatcaccgaggtgcgtcttgct
gcgtcgccaatggtggcgcgtaacgagcgtctcagcggctatgccggtagcgccggggtg
gcaaaagtccagaaactctccgatatcagccttgaagagctgccgcgtttttccaccgga
tttaaagagttcgaccgcgtactaggcggcggcgtggtgccaggaagtgccattctgatt
ggcggtaaccctggtgcggggaaatccacgctgctactgcaaacgctgtgcaaactggcc
cagcagatgaaaacgctgtatgtcaccggcgaagagtcgctgcaacaggtggcaatgcgc
gctcatcgccttggcctgccgactgacaatctcaatatgttgtcggaaaccagcatcgaa
cagatctgcctgattgccgaagaagagcaaccgaagctgatggtaattgactcgatccag
gtgatgcatatggcggatgtacagtcatcgcctggtagcgtggcgcaggtgcgtgaaacg
gcggcttatttgacacgcttcgccaaaacgcgcggtgtggcgattgtcatggtggggcac
gtaaccaaagatggttcgctggctggcccgaaagtgctggaacactgtatcgactgttcg
gtgcttttggatggcgatgccgactcccgttttcgcaccttgcgcagccataaaaaccgc
ttcggcgcggtgaatgagctgggcgtcttcgcgatgaccgaacaggggctgcgtgaagtc
agcaacccttcggcaattttcttaagtcgcggcgatgaagtgacctccggtagctcagtg
atggtggtatgggaaggaacgcgtccactgctggtggagattcaggcgctggtcgatcac
tcgatgatggcgaacccacgccgcgtggcagtggggctggaacaaaaccgtctggcaatc
ctgctggctgtgttgcaccgtcacggtggtctgcaaatggccgatcaggatgtgtttgtg
aacgtggtcggcggcgtgaaggtaaccgaaaccagtgccgacttagcgttactgctggcg
atggtttccagcctgcgcgacagaccgctgccgcaggatctggtggtgtttggtgaagtc
gggctggcaggggagatccgcccggtgcccagcggtcaggaacgaatctctgaagcggcg
aaacacggttttcgccgggcgattgttccggcggctaacgtgccgaaaaaagcgccggaa
gggatgcagatttttggcgttaaaaaactctccgacgcgcttagcgtgttcgacgactta
taa
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