Escherichia coli DH1: EcDH1_3979
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Entry
EcDH1_3979 CDS
T01996
Name
(GenBank) transcriptional regulator, IclR family
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
edh
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
edh03000
]
EcDH1_3979
Transcription factors [BR:
edh03000
]
Prokaryotic type
Helix-turn-helix
IclR family
EcDH1_3979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
MarR
HTH_Crp_2
Rrf2
HTH_20
Dimerisation
DUF7343
TrmB
Motif
Other DBs
NCBI-ProteinID:
ACX41579
LinkDB
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Position
4290842..4291666
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AA seq
274 aa
AA seq
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MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSVALTELAQQAGLPNSTT
HRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHPILRNLMEESGETV
NMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVTKLLHR
KGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISI
SGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcacccattcccgcgaaacgcggcagaaaacccgccgttgccaccgcaccagcg
actggacaggttcagtctttaacgcgtggcctgaaattactggagtggattgccgaatcc
aatggcagtgtggcactcacggaactggcgcaacaagccgggttacccaattccacgacc
caccgcctgctaaccacgatgcaacagcagggtttcgtgcgtcaggttggcgaactggga
cattgggcaatcggcgcacatgcctttatggtcggcagcagctttctccagagccgtaat
ttgttagcgattgttcaccctatcctgcgcaatctaatggaagagtctggcgaaacggtc
aatatggcggtgcttgatcaaagcgatcacgaagcgattattatcgaccaggtacagtgt
acgcatctgatgcgaatgtccgcgcctatcggcggtaaattgccgatgcacgcttccggt
gcgggtaaagcctttttagcccaactgagcgaagaacaggtgacgaagctgctgcaccgc
aaagggttacatgcctatacccacgcaacgctggtgtctcctgtgcatttaaaagaagat
ctcgcccaaacgcgcaaacggggttattcatttgacgatgaggaacatgcactggggcta
cgttgccttgcagcgtgtattttcgatgagcaccgtgaaccgtttgccgcaatttctatt
tccggaccgatttcacgtattaccgatgaccgcgtgaccgagtttggcgcgatggtgatt
aaagcggcgaaggaagtgacgctggcgtacggtggaatgcgctga
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