Entamoeba dispar: EDI_008110
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Entry
EDI_008110 CDS
T01083
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
edi
Entamoeba dispar
Pathway
edi03030
DNA replication
edi03420
Nucleotide excision repair
edi03430
Mismatch repair
edi03440
Homologous recombination
edi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EDI_008110
03420 Nucleotide excision repair
EDI_008110
03430 Mismatch repair
EDI_008110
03440 Homologous recombination
EDI_008110
03460 Fanconi anemia pathway
EDI_008110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
edi03000
]
EDI_008110
03032 DNA replication proteins [BR:
edi03032
]
EDI_008110
03400 DNA repair and recombination proteins [BR:
edi03400
]
EDI_008110
Transcription factors [BR:
edi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
EDI_008110
DNA replication proteins [BR:
edi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
EDI_008110
DNA repair and recombination proteins [BR:
edi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
EDI_008110
MMR (mismatch excision repair)
EDI_008110
DSBR (double strand breaks repair)
HR (homologous recombination)
EDI_008110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
Zn_ribbon_3
DZR
DZR_2
Zn_ribbon_15
Zn_Ribbon_1
DUF223
RMI1_C
Motif
Other DBs
NCBI-GeneID:
5878863
NCBI-ProteinID:
XP_001733974
UniProt:
B0E6F5
LinkDB
All DBs
AA seq
588 aa
AA seq
DB search
MSISEGKIADVVRARKVIEPIIVQVSNVQSVEKTQDVVKAKIHDNKYQITTIFKLKDTGL
LKRLKDFMLIKVIQGSVHVPQNITKTLVVAISNFEIVDATLKKFINTRQLEKIDHLDKVG
TAPIVKTGVPVSHQQAAPADLSKGKVTPFSLLTTFGSKLIIKGRVVSKNDKFKYAKGNLF
SFVLQDKDGAEIKATCFNDVCDEKFDQIKVGETYYITKADYKQSNGKGYRSAKMIDLDMI
IGKYTIIQKSSDEVPMISSIVPIADLVESPVDATYDICAFLVDKGPEQTYKNEKAKVTLT
FMDQSSYAVEVDFWNEDIDKTKDMENGVVYVLTSLRLREFKYKTLTVTKATKILSNTDIE
QYDEASLVNKFIQEHTTTEGITVSDLRYLANETTVEFKAGDVRTADQLYCLRKLEEKTTE
TSEDVKANVYGYFTMFKVDSGFCYLSCPDCKKKIADGSTFCEKCQKDIQPMRRFIVRASI
ADSTSSVWVTIFDEEMKKIIGKSADEMYEMNEQDSESFENLFKQLTFIECRFHLVCKKDE
YNGETRTRYTVNFIQILDSIASGTEEMKNLERMANDMKNGIIGMEEGH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctcagaagggaagatagcagacgtagtaagagcacgaaaggttatagagcca
ataattgttcaagtaagtaatgtacaatcagtagagaaaacacaagacgtagtaaaagca
aaaatacatgataataaataccaaattactactattttcaagctcaaagacactggcttg
ttaaagagattaaaagactttatgcttattaaagttatacaaggaagcgttcatgttcca
caaaatattactaaaacccttgttgttgcaatttcaaactttgagattgttgatgcaaca
ttaaaaaagtttattaatacacgtcaattagaaaaaattgatcatttagataaagttggt
actgccccaattgtgaaaactggagttcctgtttcacaccaacaagctgcaccagcagat
ctttctaaaggaaaggttacacccttttcattattgactacatttggttctaaattaatt
attaaaggaagagtagtatcaaagaatgataagtttaagtatgctaaaggaaatttattt
agttttgtacttcaagacaaagatggtgctgaaattaaagccacttgttttaacgatgta
tgtgatgaaaaatttgatcaaattaaagttggagaaacttattatattactaaagctgat
tacaaacaaagtaatgggaaaggatatagaagtgctaagatgattgatttagatatgatc
attggtaaatatactataattcagaaaagttctgatgaagtaccaatgattagttctatt
gttccaattgctgatttagttgaatcacctgtagatgctacttatgatatttgtgcgttt
ttagtagataaggggccagaacaaacatacaaaaatgagaaagcaaaagttacattaaca
tttatggatcaatcaagttatgctgttgaagtagatttttggaatgaggatattgataaa
acaaaagatatggaaaatggagttgtttatgtattaacttcattgagattacgagaattt
aaatataaaacacttactgttactaaagccactaaaatactttctaatacagatattgaa
caatatgatgaagcatctttagtgaataagttcattcaagaacatactactactgaagga
attactgtaagcgatttaagatatcttgcaaatgaaactacagtagaatttaaagcagga
gatgttagaacagctgatcaattgtattgtttaagaaaacttgaagaaaaaacaactgaa
acttcagaagatgttaaagcaaatgtatatggatattttactatgtttaaagtagatagt
ggattttgttatttatcatgtcctgattgtaaaaagaagattgctgatggttctacattt
tgtgaaaaatgtcaaaaagatattcaaccaatgagacggtttattgttcgtgcaagtatt
gcagattctactagtagtgtttgggttactatatttgatgaagaaatgaaaaaaattatt
ggaaaaagtgcagatgaaatgtatgaaatgaatgaacaagattcagaatcatttgaaaat
ctatttaaacaattaacatttattgaatgtagattccatttagtatgtaaaaaagatgaa
tacaatggagaaacaagaacaagatatactgtaaatttcattcaaatattagacagtatt
gctagtggaactgaagaaatgaaaaatttagaaagaatggcaaatgatatgaaaaatgga
attattggaatggaggaaggacattaa
DBGET
integrated database retrieval system
