Entamoeba dispar: EDI_023000
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Entry
EDI_023000 CDS
T01083
Name
(RefSeq) ATP-dependent RNA helicase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
edi
Entamoeba dispar
Pathway
edi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EDI_023000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
edi03041
]
EDI_023000
Enzymes [BR:
edi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EDI_023000
Spliceosome [BR:
edi03041
]
Complex C
Other components
Step II factors
EDI_023000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
AAA_30
ABC_tran
Flavi_DEAD
PduV-EutP
RsgA_GTPase
TsaE
SRP54
AAA_14
AAA_7
Motif
Other DBs
NCBI-GeneID:
5880413
NCBI-ProteinID:
XP_001735460
UniProt:
B0EAV5
LinkDB
All DBs
AA seq
947 aa
AA seq
DB search
MEILEEIEILSDYCFYLEELYGTADLNIAENILAVIKKCQSRTEFIQKLQKVMKFEESNK
LERFYEIYDQRKLYQELNGKEIGKLRSKRFNEEYKRRKINEEDNKIIRKKDRGRTNEKSY
DKKRISSEERNEMEKLIAAGIMKQSDLPIEEILKEEITIKDVKLNEEEPRFLKGKIKEIN
NSKIKEVEKQPEGHLQRSAIMAIQIAKKRKDKKEKKEEEKIEGIEIKDKKRKKELEINIK
EIKDIKEIIKEIGNIIPKEKEKKEWEQREEKITKEFKKSNEEKRKELPIYLMKNKLMESI
KKNQIIILIGETGCGKTTQLTQYLDEEGYSKKGKIGCTQPRRVAAISVSQRVAEEMGVKL
GEEVGYSIRFEDKTTEKTRIKYMTNGMLLREYLIDKDLPQYKVLILDEAHERTVGIDILF
GLLKETIKHRPEFKLIITSATLDANKFSIYFNKAPIIYIPGRTFPVEKLYLEEPEMDYIQ
SGIETIMKIHLTQPPGDILFFLTGQEEIDFTCLLINEKIKKLDKRYPKLIALPIYASLST
EQQKKIFEPAPPFTRKCIIATNIAETSITIDGIYFVVDSGFVKQKIHNPKLGMDQLLITP
ISQACADQRAGRAGRTGPGKCYRLYTQKAYLNEMPIVTIPEIQRANLADIVLILKAIGIN
NVIDFDYMDPPMYNTLISALHHLYAISALDDNGKLTQLGRKMAEFPLEPPLSKMLIVSEQ
FGCSEEIVTIVATLSVGNLFIRPKEKEEEADRRKRQLSNSAGDHLTMLNIYNDWIKNQKS
PSWCKENYINFRSLYKSEDIRNQLIKIMKKYNIQLISSHNNPIPIIKSIVSGFFVHAAKR
DPQEGYRTLVDGQQVFIHPTSSLFGRNPDWVIYHELVLTTKEYMREVIAIDPQWLIELAP
AFYQKSDGSQINERMKKEKLKPLFNGIKKDQKPWKVSHRTIIGSSYH
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggaaatattagaagagattgaaatcttatctgattattgtttttatttagaagaatta
tatggaacagcagatctcaatatagcagaaaatattttagctgttattaaaaaatgtcaa
agtagaacagagtttattcaaaaattacaaaaagttatgaaatttgaagaatctaataaa
cttgaaagattttatgaaatatatgatcaaagaaaattatatcaagaactaaatggaaaa
gaaattggaaaattaagaagtaaacgatttaatgaagaatataaaagaagaaaaattaat
gaagaagacaataaaataataagaaaaaaagatagaggaagaacaaatgaaaagagttat
gataaaaaaagaataagttcagaagaaagaaatgaaatggaaaaattaattgcagcagga
ataatgaaacaatcagatttaccaatagaagaaattttaaaagaagaaataacaataaaa
gatgttaaattaaatgaagaagaaccaagatttcttaaagggaaaattaaagaaattaat
aattcaaaaataaaagaagtagaaaaacaaccagaaggacatttacaaagaagtgcaata
atggcaattcaaattgcaaagaaaagaaaagataaaaaagaaaaaaaagaagaagaaaaa
attgaaggaattgaaattaaagataaaaaaagaaaaaaagaattagaaataaatattaaa
gaaattaaagatataaaagaaattattaaagaaataggaaatataataccaaaagaaaaa
gaaaaaaaagaatgggaacaaagagaagaaaaaataacaaaagaatttaaaaaaagtaat
gaagaaaaaagaaaagaattaccaatatatttaatgaaaaataaattaatggaaagtatt
aaaaaaaatcaaataattattcttattggagaaacaggatgtggtaaaacaacacaatta
acacaatatttagatgaagaaggatatagtaaaaaaggaaaaattggatgtactcaacca
agaagagtagctgctattagtgtatctcaaagagttgcagaagaaatgggagtaaaatta
ggagaagaagtaggatacagtattagatttgaagataaaacaacagaaaaaacaagaatt
aaatatatgactaatggaatgttattaagagaatatcttattgataaagatttacctcaa
tataaagttcttattcttgatgaagcacatgaaagaacagttggaatagatattttattt
ggattattaaaagaaacaattaaacatagaccagaatttaaattaataataacatcagct
acattagatgcaaataaattttctatatattttaataaagcacctattatttatattcca
ggaagaacatttccagtagaaaaattatatttagaagaaccagaaatggattatattcaa
agtggaattgaaactattatgaaaattcatcttacacaaccacctggagatattttattt
tttttaacaggtcaagaagaaattgattttacttgtttattaattaatgaaaaaattaaa
aaattagataaaagatatcctaaattaattgctttacctatttatgcttctttatctact
gaacaacaaaaaaaaatttttgaaccagcaccaccttttactagaaaatgtattattgct
acaaatatagctgaaacttctattactattgatggaatttattttgttgtagattcaggt
tttgttaaacaaaaaatacataatccaaaacttggaatggatcaattattaataactcca
attagtcaagcttgtgctgatcaaagagctggtagagctggaagaactggacctggaaaa
tgttatagattatatactcaaaaagcatatttaaatgaaatgcctattgtaactattcca
gaaatacaaagagcaaatcttgctgatattgttttaatattaaaagcaattggaattaat
aatgttattgattttgattatatggatcctccaatgtataatacattaattagtgcttta
catcatctttatgctattagtgcattagatgataatggaaaattaactcaacttggaaga
aaaatggcagaatttcctttagaaccacctttatcaaaaatgttaattgtatcagaacaa
tttggatgtagtgaagaaatagtaacaattgtagcaactttaagtgttggtaatttattt
attagaccaaaagaaaaagaagaagaagctgatagaagaaaaagacaattaagtaattca
gctggtgatcatttaacaatgttaaatatttataatgattggataaaaaatcaaaaatct
cctagttggtgtaaagaaaattatattaactttagatctttatataaatctgaagatatt
agaaatcaattaataaaaataatgaaaaaatataatattcaacttatttcttctcataat
aatcctattccaattattaaatctattgtttctggattttttgttcatgcagcaaaaaga
gatcctcaagaaggttatagaactttagttgatggtcaacaagtatttattcatcctact
agttctttatttggaagaaatcctgattgggttatatatcatgaacttgtattaactact
aaagaatatatgagagaagtaatagctattgatcctcaatggcttattgaattagcacca
gcattttatcaaaaatcagatggatcacaaattaatgaaagaatgaaaaaagaaaaatta
aaaccattatttaatggaataaaaaaagatcaaaaaccatggaaagtatctcatagaaca
attattggatcatcttatcattaa
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