Entamoeba dispar: EDI_027640
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Entry
EDI_027640 CDS
T01083
Name
(RefSeq) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
edi
Entamoeba dispar
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
edi03016
]
EDI_027640
Enzymes [BR:
edi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EDI_027640
Transfer RNA biogenesis [BR:
edi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EDI_027640
Prokaryotic type
EDI_027640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
DHOase
Motif
Other DBs
NCBI-GeneID:
5883318
NCBI-ProteinID:
XP_001738247
UniProt:
B0EJ61
LinkDB
All DBs
AA seq
637 aa
AA seq
DB search
MKRGSQKPIQKIKKISMVQSIPTQPTDPSTVRIIDYSKNNEKKDELKREEEKVKEMKEKR
REQSRNHEKEEIVNVIEKPKEINMGITSFVRKGKSINGLTKHLVSDFQVREIGLDNSIAD
IIDRENVRGVTKITEEKIEEVVNKEEWINKMRLIIGTEVDEIAPKIFDEKVNRIEIKKPL
NKQERTEFHMVVKELPNYDSTCDNGILVLKKGAKKIRGGREKNSILKCVLRKSNIDTGEA
INRISKALNLGKNAICFAGMKDKRGVTCQYITIPGVKQELIEESLKKSICNGITLSQFEH
VNHMIKLGDLLGNEFRVIIREIDNVDEVLKNCESIKKFGYINYFGLQRFGSCGTTHLIGK
ALLKEEYQEAADLMMKEGNDTFSVAQGKKYYKEKQYKLAYEIIPIKRNIERALMQALDKQ
VKLGVSISNGMFKTAIDNAIVYKTKSLYLHAYQSYVWNQVVSKRFEKYGNAVLVGDLYET
KQGTIDFVTEELLPSICLHQIIIPLPAQGITMPKNEIKNFFDEVLSKDGFILDTFPTKIY
NVAITGDQRKIVIQPKDVEYQVIHYGNVGQDLLDERGYLRTDYQSGDRIGLWIKFQLEPS
AYATMLFRELLKMPTDLDCQKQLTEEMKEKMEEEEEH
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaggaagtcagaagccgattcaaaaaatcaaaaaaatctctatggtgcaaagt
attcctacacaaccaactgacccttctactgttagaataatagattactcaaaaaacaat
gaaaagaaagatgaactaaaacgagaagaagaaaaagtaaaagaaatgaaagaaaaaaga
agagaacaaagcagaaatcatgaaaaagaggaaatagttaatgttattgaaaaaccaaaa
gagattaatatgggtataacatcttttgttagaaaaggaaaaagtattaacggattaaca
aaacatcttgtgagtgattttcaagtacgtgaaattggattagataattctatagcagat
attattgatagagaaaatgtgaggggtgttacaaaaattacagaagaaaaaatagaagaa
gtggttaataaagaagaatggattaataaaatgagattaattattggaacagaagtagat
gaaatagccccaaaaatttttgatgagaaagtaaatcgaattgaaattaaaaaaccatta
aataaacaagaaagaacagagtttcatatggttgttaaagaacttccaaattatgactca
acatgtgataacggaattcttgtgttaaaaaaaggtgcaaaaaaaattcgtggtggaaga
gaaaaaaactctattttaaaatgtgttttaaggaaatcaaatattgatactggtgaagct
attaatcgtatttcaaaagcattgaatttaggtaaaaatgctatttgttttgctggaatg
aaagacaaaagaggagttacatgccaatatattactatccctggagttaaacaagaatta
attgaagagagtttaaaaaaaagtatatgtaatggaattactttaagtcaatttgaacac
gtaaatcatatgattaaattaggagatttacttggaaatgaatttagagttattattagg
gaaattgataatgttgatgaagttcttaaaaattgtgaaagtattaaaaagtttggatat
attaattattttggactacaacgatttggtagttgtggtactacccatttaattggaaaa
gcattattaaaagaagaatatcaagaagctgcagatttaatgatgaaagaaggaaatgat
acttttagtgttgcacaaggaaaaaaatattataaagaaaaacaatacaaattagcatat
gaaattattccaattaaaagaaatattgaaagagctcttatgcaagcattagataaacaa
gttaaacttggagtcagtataagtaatggaatgtttaaaactgctattgataatgcaatt
gtttataaaactaaatcgttatatcttcacgcatatcaaagttatgtttggaatcaagtt
gtctctaagagatttgaaaaatatggtaatgcagtattagtaggtgatttatatgaaaca
aaacaaggaacaattgattttgttactgaggaattattaccttcaatttgtttgcatcaa
attattatcccacttcctgcacaaggaattacaatgccaaaaaatgaaataaaaaatttc
tttgatgaagtactttctaaagatgggttcatacttgatactttcccaactaaaatttat
aatgttgcaataactggagatcagagaaaaattgtcattcaaccaaaagacgtggagtat
caagttattcattatggaaatgttggacaagaccttcttgatgaaagaggttatcttaga
actgactaccaaagtggtgatagaattggactttggattaagttccaattagaaccttct
gcttatgccactatgttattcagagaattattaaaaatgccaacggatttggattgtcaa
aaacaattaactgaagaaatgaaagaaaaaatggaagaagaagaagaacattaa
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