Entamoeba dispar: EDI_037120
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Entry
EDI_037120 CDS
T01083
Name
(RefSeq) replication factor C subunit
KO
K10756
replication factor C subunit 3/5
Organism
edi
Entamoeba dispar
Pathway
edi03030
DNA replication
edi03410
Base excision repair
edi03420
Nucleotide excision repair
edi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EDI_037120
03410 Base excision repair
EDI_037120
03420 Nucleotide excision repair
EDI_037120
03430 Mismatch repair
EDI_037120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
edi03032
]
EDI_037120
03036 Chromosome and associated proteins [BR:
edi03036
]
EDI_037120
03400 DNA repair and recombination proteins [BR:
edi03400
]
EDI_037120
DNA replication proteins [BR:
edi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EDI_037120
DNA Replication Termination Factors
ELG1-RFC complex
EDI_037120
Chromosome and associated proteins [BR:
edi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
EDI_037120
DNA repair and recombination proteins [BR:
edi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EDI_037120
Check point factors
HRAD17(Rad24)-RFC complex
EDI_037120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rep_fac_C
AAA_22
RuvB_N
Rad17
AAA_14
AAA_assoc_2
DUF815
AAA_18
AAA_11
AAA_24
AAA_5
ResIII
AAA_16
AAA_19
AAA_7
Mg_chelatase
RCF1-5-like_lid
NPHP3_N
ATPase_2
nSTAND3
AAA_30
TniB
RNA_helicase
TIP49
NB-ARC
AAA_2
AAA_33
IstB_IS21
AAA_3
AAA_28
Motif
Other DBs
NCBI-GeneID:
5884601
NCBI-ProteinID:
XP_001739466
UniProt:
B0EMU2
LinkDB
All DBs
AA seq
539 aa
AA seq
DB search
MSLPWVEKYRPSTTDGIFGHEYILESLKQFINANQIPHMLFYGPPGTGKTTTALAIVKQL
CGTKFSALVLELNASDERGIDVVRDQIKSFASTRTLYTNCTKFIILDESDKLTKDAQNAL
RRTLEQFSANCRFIFICNEVHLITPAIQSRCAKMRFGPLSPNALTKIVENITTKEGMEID
DDAKKSIIEISKGDARSIINTLQALSMTCKQITNSTLYTMVGLPTPAQIDDIISELLSSP
YFESFTVVDNLIKAGLSLNDIIIRVVPKLIEGKLVSVLDKTARIQCLYQLSLIEQALSIG
GNERTQTAAFVAAFQLLQISSPMLKKKPKRKLKIFKIFFMAIVEKELQYIKKERFLQNKP
STMYSNPFRLQYFHNANEGPHGLTSIFLNYFFDTTIVHMAPLNPLGSFYYQLDALLEYHP
HICIGEGYGALILYHFLTNHKYDGNSVLMYLPLSLVHSIHLPSKGKHILVFDLKEVNEKN
AIKLLPQEGEINKEETDSSICLKKGNISIYLIKLNKQQFVNIEEAKTNKFTLKNVIETE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcccctgggtggaaaagtatcgtccttcaactacagatggtatatttggtcat
gagtatattcttgaatctttaaaacaatttattaatgccaaccaaatacctcatatgctt
ttttatggtccacctggcacaggtaaaactacaacagctttggctattgtaaaacaatta
tgtggaactaaattctctgcattagtactagagttgaatgcatcagacgaaagagggatt
gatgttgttagagatcaaatcaaatcatttgcatcaacacgtaccttatatactaactgt
actaaatttattatattagatgaaagcgataaattaactaaagatgctcaaaatgcactt
cgaagaacattagagcaattttctgcaaattgtagatttatttttatttgtaatgaagtt
catttaataactccagctattcaatcacgttgtgcaaaaatgagatttggtccattatcc
ccaaatgctttaacgaaaattgttgaaaatattacaacgaaggaaggaatggaaattgat
gatgatgcaaaaaagtctatcatagaaatatcaaaaggagatgctagaagtattattaat
actttacaagcattgtcaatgacttgtaaacaaattactaattcaactttatacacgatg
gttggattacctactccagcacaaatcgatgatattatttcagagttattaagttctcct
tattttgaatcttttactgttgtagataatttaattaaagctggtctttctttaaatgat
attatcattcgtgtagtacctaaattaattgaagggaaattagtctctgtcttagataaa
actgccagaattcaatgtctttaccaactttctcttattgagcaagcattatctattggt
ggaaatgaacgaactcaaacagcggcttttgtggcagcctttcaattattacaaatttca
tctccaatgttaaaaaaaaaacctaaaagaaaactcaaaatttttaaaatcttttttatg
gctatcgttgaaaaagaattacaatacattaagaaagaacgtttcttacaaaacaaacct
agtactatgtattctaatcctttcagacttcaatattttcataatgccaatgaaggacca
catggattaaccagtatatttcttaattatttttttgatactacaatagtccatatggca
ccattaaatcctttaggaagtttttattatcagttagatgctttattagaatatcaccct
catatttgcattggagaaggatatggtgctcttattttgtatcatttcttaactaatcat
aaatacgatggtaattcagtgttaatgtaccttcctttatctcttgtacattcaattcat
cttccatctaaaggtaaacacatcttagtttttgatttaaaagaagttaatgaaaaaaat
gctatcaaattacttcctcaagaaggtgaaataaataaagaagaaacagatagttcaatt
tgtttaaagaaaggaaatattagtatttatttaatcaaacttaacaaacaacaatttgtt
aatattgaagaagctaagacaaataaatttactttaaaaaatgttattgaaactgaatga
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