Entamoeba dispar: EDI_071580
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Entry
EDI_071580 CDS
T01083
Name
(RefSeq) mRNA 3'-end-processing protein YTH1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
edi
Entamoeba dispar
Pathway
edi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EDI_071580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
edi03021
]
EDI_071580
03019 Messenger RNA biogenesis [BR:
edi03019
]
EDI_071580
Transcription machinery [BR:
edi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EDI_071580
Messenger RNA biogenesis [BR:
edi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EDI_071580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
5879413
NCBI-ProteinID:
XP_001734501
UniProt:
B0E809
LinkDB
All DBs
AA seq
166 aa
AA seq
DB search
MDISRVFREIKTERDPRTIKSNEKTIVCQHWLRGMCRKGANCDFLHRLDEERTPACHHFV
KYGKCEKPECPFKHEDPQKAIPCEWYKRGFCKHGKKCKHGHVPKLMCPLFYLGFCPYGKK
CKFVHPTISVPRETIEKTQPRGERFPRDGDDRNANFKHEFTKPKRD
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggatatcagtcgtgtttttcgtgaaattaaaactgaacgagatcctcgtacaattaaa
tcaaatgaaaaaacaattgtatgtcaacattggttaagaggaatgtgtagaaaaggagct
aattgtgattttcttcatcgtttagatgaagaaagaacacctgcttgtcatcactttgtg
aaatatggaaaatgtgagaaaccagaatgtccatttaaacatgaagacccacaaaaagca
attccttgtgaatggtataaaagaggattttgcaaacatggaaagaaatgtaaacatggg
catgtcccaaaattaatgtgtcctttattttatcttggattttgtccatatggtaaaaag
tgtaaatttgttcatccaaccatttctgttccaagagaaactatagaaaaaacacagcct
agaggagagcgttttcctcgtgacggagatgatagaaatgcaaatttcaaacatgaattt
acaaaaccaaaaagagattaa
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