Entamoeba dispar: EDI_092380
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Entry
EDI_092380 CDS
T01083
Name
(RefSeq) ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
edi
Entamoeba dispar
Pathway
edi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EDI_092380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
edi03041
]
EDI_092380
03009 Ribosome biogenesis [BR:
edi03009
]
EDI_092380
Enzymes [BR:
edi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EDI_092380
Spliceosome [BR:
edi03041
]
Complex A
U1 snRNP components
U1 related factors
EDI_092380
Complex B
EDI_092380
Ribosome biogenesis [BR:
edi03009
]
Eukaryotic type
Pre-60S particles
Helicases
EDI_092380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
5881188
NCBI-ProteinID:
XP_001736203
UniProt:
B0ED30
LinkDB
All DBs
AA seq
535 aa
AA seq
DB search
MSGRSRSNSHRYTDRSRSRSREHSHRYEDYKRNDDYSRRDDYKRRDDYDRRDDYDRRDNY
DRRDDYKRRDDYSRRNDHGRSYRSSGNVVNKYESISTKQLQPVNYDINTLPPFKKDFYVE
SPITLNRNIEEVSRYLQENEIQVNGCESIKALLTFEECNFPQSILDVIKEQNYIKPTPIQ
AIGWPIVLQGKDVVGIAETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRELVC
QIADEAIKFTKGTSIKTVRCFGGVPQSCQMKDFQSGCDICVATPGRLIDFIKRGVTNLSR
CTFLILDEADRMLEMGFEVQVQDIIGQIRPDRQTVMWTATWPQAIQQFALGFMFHPLQIN
IGNPDLHANESVKQIVEVCQERDRDSKMNEIVKRIGSEKKVLIFVKTKRSADNLCYKLRD
QRYRVACMHGDKAQAERDRALSDFKSGAVNYLIATDLASRGLDIRNIEIVINYEMPSDIE
NYIHRIGRTGRMGRSVEGEAISLFTYADARLAKDLISVLKGAHQEVPSELLNMRY
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagaagtcgatcaaattcacatagatacactgatagaagtaggtcaagaagt
agagaacactcacacagatatgaggactataaacgaaatgatgattatagtagaagagat
gattataagagaagggatgactatgatagaagagacgattacgatagaagagataactac
gatagaagggacgattataaaagaagagatgattatagtagaagaaatgatcatggtaga
agttatcgttcaagtggaaatgttgttaataaatatgaaagtatatctactaaacaacta
caacctgtcaattatgatattaatactcttccaccatttaaaaaagatttttatgttgaa
tctccaattacgttaaacagaaatatagaagaagtgtcacgatatttacaagaaaatgag
attcaagttaatggatgtgaatctataaaagctcttttaacttttgaagaatgtaatttt
ccacaatctattcttgatgtaataaaagaacaaaactacattaaaccaacaccaatccaa
gcaattggatggccaattgttcttcaagggaaagatgtagttggtattgcagagactgga
tcaggtaaaacaatttcatttttaattccagcaattatacatatattagatacaccacta
gcacagtatagagaaggaccaagagtattaattttagcacctactcgtgaattagtttgt
caaattgcagatgaagcaattaaatttacaaaaggaacttcaatcaaaacagtacgatgt
tttggaggagtacctcaatcttgtcaaatgaaagattttcaatcaggttgtgatatttgt
gttgctacaccaggtagattaattgattttattaaacgaggagttactaatctttcaagg
tgtacattcttaattcttgatgaagctgacagaatgttagagatgggatttgaagttcaa
gttcaagatattattggtcaaattcgtcctgatagacaaacagttatgtggacagctaca
tggccccaggctattcaacaatttgcccttgggtttatgtttcatccgttacaaattaat
attggaaatccagatcttcatgcaaatgagtctgttaaacaaattgtagaagtatgtcaa
gaacgagatagagactctaaaatgaatgaaattgttaaacgaattggatcagaaaagaaa
gtactaatatttgtaaaaacaaaacgaagtgctgataatttgtgttataaattacgtgat
caacgatatagagttgcttgtatgcatggagataaggcacaagcagaaagagacagagca
ctttctgattttaagagtggagctgtcaactatttgattgcaacagatctagcgtcaaga
ggattagatattagaaatatagagatagttattaattatgaaatgccaagtgacatagaa
aattatattcatagaattggtagaactggaagaatgggaagaagtgttgaaggagaggct
atttcattatttacttatgcggatgcaaggttagccaaagatttaatctcggtcttaaaa
ggagcacatcaagaagttccatctgaacttctcaatatgaggtattaa
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