Entamoeba dispar: EDI_139520
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Entry
EDI_139520 CDS
T01083
Name
(RefSeq) ATP-dependent RNA helicase DDX3X
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
edi
Entamoeba dispar
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edi03019
]
EDI_139520
03041 Spliceosome [BR:
edi03041
]
EDI_139520
03036 Chromosome and associated proteins [BR:
edi03036
]
EDI_139520
Enzymes [BR:
edi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EDI_139520
Messenger RNA biogenesis [BR:
edi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EDI_139520
mRNA cycle factors
Common to processing body (P body) and stress granule
EDI_139520
Spliceosome [BR:
edi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EDI_139520
Chromosome and associated proteins [BR:
edi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
EDI_139520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
SNF2-rel_dom
HEM4
Utp25_C
Motif
Other DBs
NCBI-GeneID:
5884744
NCBI-ProteinID:
XP_001733479
UniProt:
B0EN85
LinkDB
All DBs
AA seq
392 aa
AA seq
DB search
MPRQANLSHRVTVFPVALILAPTRELGQQIYEEAVKFTENTPIRSVCVYGGSDAYIQIQE
MGKGCDILVATTGRLLYFTEKKIVSLSSVRYLIFDEADRMLDMGFEPQIREICEDNEMPP
VGKRQTLMFSATFPKQIQRLAADFLDNYVFITVGRAGSTVESIQQIILWVEEQIKQEAIL
DVLREFAGKGEKTVIFVETKKGADMLENYLYDHGYKVDSIHGDRSQADRDFSLKRFKENV
IQLLVATDVASRGLDIPDIEVVINYDMPNEIESYVHRVGRTGRAGKKGTAITFINDKTQN
LIPSLVSLLEEAKQEIPDWLEEKAQEYRKPFGSKRGRKGGFNRRGAGRFXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXYYLLYLPFY
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgccaagacaagcaaatttatcacatagagttactgtatttcctgttgctttaattctt
gcaccaacaagagaattaggacaacaaatttatgaagaagcagttaaattcactgaaaat
accccaattagatcagtatgtgtttatggaggatctgatgcttatattcaaattcaagaa
atgggaaaaggatgtgatattcttgttgctactacaggaagattattatattttactgaa
aagaaaattgtttcattatcttctgttagatatcttatttttgatgaggctgatagaatg
cttgatatgggatttgaaccacaaattagagaaatttgtgaagataatgaaatgccacct
gttggaaaacgtcaaacattaatgttttctgctacttttcctaaacaaattcaaagactt
gctgcagatttcttagataattatgtctttattactgttggaagagcaggaagtactgtt
gaatcaattcaacaaattattttatgggttgaagaacaaataaaacaagaagctatttta
gatgttttacgagaatttgctggaaaaggtgagaaaacagttatttttgttgaaacaaag
aaaggtgctgatatgttagaaaattatttatatgatcatggatacaaagtagatagtatt
catggagatcgttctcaagctgatcgtgacttttcattgaaaaggtttaaagaaaatgtt
attcaactacttgttgcaactgatgttgcttctagaggattagacattccagacattgag
gttgtgattaattatgatatgccaaatgaaattgagagttatgtccatcgtgtcggaaga
actggacgggctggtaaaaaaggaacagcaattactttcattaatgataaaacccaaaat
ttaataccatcgttagtctcattattagaagaagcaaaacaagaaatcccagactggcta
gaagaaaaggcacaagaatacagaaaaccatttggctcaaaaagaggtagaaaaggtggg
tttaatagaagaggagctggaaggtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnntatattatttactctaccttccattttattaa
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