KEGG   Entamoeba dispar: EDI_146080
Entry
EDI_146080        CDS       T01083                                 
Name
(RefSeq) pre-mRNA-processing factor
  KO
K12855  pre-mRNA-processing factor 6
Organism
edi  Entamoeba dispar
Pathway
edi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:edi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EDI_146080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:edi03041]
    EDI_146080
Spliceosome [BR:edi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    EDI_146080
 Complex C
   U5 SnRNP specific factors
    EDI_146080
SSDB
Motif
Pfam: TPR_14 PRP1_N HAT_PRP39_N HAT_Syf1_CNRKL1_N HAT_PRP39_C TPR_2 TPR_8 UTP6_C TPR_15 TPR_1 TPR_16 Siva
Other DBs
NCBI-GeneID: 5886612
NCBI-ProteinID: XP_001741641
UniProt: B0EUB1
LinkDB
AA seq 870 aa
MKPQGKYDFLNMEGPKGYIAGSLREDTGFITQNDIGPARTLMVGEANFDDDHEEENGIND
EIAEKTYEIVEKRMEERRKRRKEIREKKEQEEYEKKHPTISQQFADIKDEMKKMSLEDWM
KIPEATGRRNYKVQNEFLEGRHMPLPDTVIVSNYNHNQIKGTINPTQTDLIQLGNTRKKT
LQLSLDGSKTSISSVDVSGYLTELGQNQELTENDITQIKQYKFLFKSMRTTKPQLAVGWI
QSALIEESLGHLSAARKIIMEGTQKCPNSDEIWLQAIRLHPIEVRSDICASAIAVLPKKP
SLWLEAIELERNIIEKRKIAHKGLEFVSNSIELWKKTIELEDGEIQKQTMKQAVETLPQC
VELWIIFAEKENFENSKKILNQSLKILPKEPLIWIAAARIEEIKGHNPEKAIGIIKKALK
YFDKENLSIEKNIWIDEGVKYINEAKATLKGIIDYIIDYKEKDLISFWRHIEQTYSNDTI
TKMIYQHAVQVQPQNDELWMELIRVCGNDEKEIEVVFQHAIDVIDSEEIWKKFVEWCMKR
TPSIAESLLKKIIDKGKGGESVWIGIIDLELNENHLQEAFNYVRQGIKICKSMKLIKKGI
KIALSLKDNEKENEMILSGDSIDPQNVDLILFKIKREIRKQNIIDARKIYENALKLNETS
VKLWIVAAQSELHQPGPFSVSKARTIYERGKIKNPTNQDLWISLIHFERENGNKKVSDSY
LSEGIKVCKSNGKLWKEFIQTSPINKKKTACSDALRAFEGRDKDVDYANVVFAVAEFLYN
TGKKEKAEEWFRKVIFIDPSYGDAWIWIYKILYEQKGKIIDFEEKKRDCIEKCGLFEHKK
GLVWSQVKRRNESCRYSIEEILEKGRLVIN
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgaaaccacaaggaaaatatgattttttaaatatggaaggacctaaaggttatatcgct
ggttcattaagagaagacacaggttttattactcaaaatgatattggtccagcaaggaca
ttaatggttggtgaagcaaattttgatgatgaccatgaagaagaaaatggtatcaatgat
gaaattgcagaaaagacatatgagattgtagaaaagagaatggaagaacgaagaaaaaga
agaaaagaaattagagaaaagaaagaacaagaagaatatgaaaaaaaacatccgactatt
tctcaacaatttgcagatatcaaagatgagatgaaaaaaatgagtcttgaagattggatg
aaaattcctgaagcaacaggaagaagaaattataaagtccaaaatgaatttttagaaggt
agacatatgccattacctgatactgtgattgtatctaattataatcataatcaaatcaaa
ggaacaattaatcctactcaaacagatctcattcaattaggaaatactagaaaaaaaaca
ttgcaattaagtcttgatggatccaaaacttctataagttcagttgatgttagtggatat
cttacagaattaggacaaaatcaagaattaacagaaaatgatattacacaaattaaacaa
tataaatttttatttaaatcaatgagaacaacaaaacctcaattagctgttggatggatt
caatcagcattaatagaggaaagtttaggacatctttctgcagcaagaaaaattattatg
gaaggaactcaaaaatgtccaaatagtgatgaaatttggttacaagcaattagacttcat
cctatagaagtaagaagtgatatttgtgcaagtgcaatagctgtacttccaaagaaaccg
tcattatggcttgaagcaattgagcttgaaagaaatattattgaaaaaagaaaaattgca
cataaaggactagaatttgtaagcaattcaattgaattatggaagaaaactattgaatta
gaagatggagaaatacaaaaacaaactatgaaacaagctgttgaaactctaccacaatgt
gttgaattatggattatctttgctgaaaaagagaattttgaaaatagtaaaaagatttta
aatcaaagtcttaaaattcttcccaaagaaccccttatttggattgctgcagcaaggata
gaagagataaaaggacacaacccagaaaaagcaattggtattattaaaaaagcattaaaa
tattttgacaaagaaaatctttctattgaaaaaaatatttggattgacgaaggagtaaaa
tatattaatgaagcaaaagctacattaaaaggaattattgattatataatcgattataaa
gaaaaggatttaatttctttttggagacacatagaacaaacatattcaaatgatacaatt
actaaaatgatttatcaacatgcagtacaagtacaaccccaaaatgatgagttatggatg
gaactcattcgtgtatgtggtaatgatgaaaaagaaattgaagttgtattccaacatgct
attgatgtaatcgacagtgaagaaatatggaaaaaatttgttgaatggtgtatgaaaaga
acaccctctattgcagaatctttattaaaaaagataattgataaaggcaaaggaggtgaa
agtgtatggattggaataattgatctagaattaaatgaaaatcatttacaagaagcattc
aactatgttcgacaaggaataaaaatttgtaaatctatgaaacttattaaaaaaggaatt
aaaatcgctttgtcattaaaagataatgaaaaagaaaatgaaatgattctatctggtgat
tctattgatcctcaaaatgttgacttaatattatttaagataaaaagagagataagaaaa
caaaatattattgatgcaagaaaaatctatgaaaatgctttaaaattaaacgaaacatct
gtaaagttatggattgtagctgctcaatcagagcttcaccaacctggacctttctctgtt
agcaaagctcgaacaatttatgaaaggggaaaaattaaaaatcctacaaatcaagactta
tggatttccttaattcattttgaaagagagaatggaaacaaaaaagtttcagactcatat
ctatcagaaggaataaaggtatgtaagtccaatggaaaattatggaaagaatttatccaa
acatctccaattaacaaaaagaaaactgcttgctctgatgcactaagagcttttgaagga
agagataaagatgttgattatgccaatgtcgtatttgccgttgcagagtttctttataac
actggtaaaaaagaaaaagcagaagaatggttcagaaaagttatttttattgatccaagt
tatggagatgcatggatttggatttacaaaattctttatgaacaaaaaggaaaaattata
gactttgaagaaaagaaaagggattgtattgaaaagtgtggtttgtttgagcataaaaaa
ggattggtatggtctcaggtcaaacgaagaaatgagtcatgtcgatactctattgaagag
atacttgagaaagggagattagttataaattag

DBGET integrated database retrieval system