Entamoeba dispar: EDI_146080
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Entry
EDI_146080 CDS
T01083
Name
(RefSeq) pre-mRNA-processing factor
KO
K12855
pre-mRNA-processing factor 6
Organism
edi
Entamoeba dispar
Pathway
edi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EDI_146080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
edi03041
]
EDI_146080
Spliceosome [BR:
edi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
EDI_146080
Complex C
U5 SnRNP specific factors
EDI_146080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
PRP1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_2
TPR_8
UTP6_C
TPR_15
TPR_1
TPR_16
Siva
Motif
Other DBs
NCBI-GeneID:
5886612
NCBI-ProteinID:
XP_001741641
UniProt:
B0EUB1
LinkDB
All DBs
AA seq
870 aa
AA seq
DB search
MKPQGKYDFLNMEGPKGYIAGSLREDTGFITQNDIGPARTLMVGEANFDDDHEEENGIND
EIAEKTYEIVEKRMEERRKRRKEIREKKEQEEYEKKHPTISQQFADIKDEMKKMSLEDWM
KIPEATGRRNYKVQNEFLEGRHMPLPDTVIVSNYNHNQIKGTINPTQTDLIQLGNTRKKT
LQLSLDGSKTSISSVDVSGYLTELGQNQELTENDITQIKQYKFLFKSMRTTKPQLAVGWI
QSALIEESLGHLSAARKIIMEGTQKCPNSDEIWLQAIRLHPIEVRSDICASAIAVLPKKP
SLWLEAIELERNIIEKRKIAHKGLEFVSNSIELWKKTIELEDGEIQKQTMKQAVETLPQC
VELWIIFAEKENFENSKKILNQSLKILPKEPLIWIAAARIEEIKGHNPEKAIGIIKKALK
YFDKENLSIEKNIWIDEGVKYINEAKATLKGIIDYIIDYKEKDLISFWRHIEQTYSNDTI
TKMIYQHAVQVQPQNDELWMELIRVCGNDEKEIEVVFQHAIDVIDSEEIWKKFVEWCMKR
TPSIAESLLKKIIDKGKGGESVWIGIIDLELNENHLQEAFNYVRQGIKICKSMKLIKKGI
KIALSLKDNEKENEMILSGDSIDPQNVDLILFKIKREIRKQNIIDARKIYENALKLNETS
VKLWIVAAQSELHQPGPFSVSKARTIYERGKIKNPTNQDLWISLIHFERENGNKKVSDSY
LSEGIKVCKSNGKLWKEFIQTSPINKKKTACSDALRAFEGRDKDVDYANVVFAVAEFLYN
TGKKEKAEEWFRKVIFIDPSYGDAWIWIYKILYEQKGKIIDFEEKKRDCIEKCGLFEHKK
GLVWSQVKRRNESCRYSIEEILEKGRLVIN
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaaggaaaatatgattttttaaatatggaaggacctaaaggttatatcgct
ggttcattaagagaagacacaggttttattactcaaaatgatattggtccagcaaggaca
ttaatggttggtgaagcaaattttgatgatgaccatgaagaagaaaatggtatcaatgat
gaaattgcagaaaagacatatgagattgtagaaaagagaatggaagaacgaagaaaaaga
agaaaagaaattagagaaaagaaagaacaagaagaatatgaaaaaaaacatccgactatt
tctcaacaatttgcagatatcaaagatgagatgaaaaaaatgagtcttgaagattggatg
aaaattcctgaagcaacaggaagaagaaattataaagtccaaaatgaatttttagaaggt
agacatatgccattacctgatactgtgattgtatctaattataatcataatcaaatcaaa
ggaacaattaatcctactcaaacagatctcattcaattaggaaatactagaaaaaaaaca
ttgcaattaagtcttgatggatccaaaacttctataagttcagttgatgttagtggatat
cttacagaattaggacaaaatcaagaattaacagaaaatgatattacacaaattaaacaa
tataaatttttatttaaatcaatgagaacaacaaaacctcaattagctgttggatggatt
caatcagcattaatagaggaaagtttaggacatctttctgcagcaagaaaaattattatg
gaaggaactcaaaaatgtccaaatagtgatgaaatttggttacaagcaattagacttcat
cctatagaagtaagaagtgatatttgtgcaagtgcaatagctgtacttccaaagaaaccg
tcattatggcttgaagcaattgagcttgaaagaaatattattgaaaaaagaaaaattgca
cataaaggactagaatttgtaagcaattcaattgaattatggaagaaaactattgaatta
gaagatggagaaatacaaaaacaaactatgaaacaagctgttgaaactctaccacaatgt
gttgaattatggattatctttgctgaaaaagagaattttgaaaatagtaaaaagatttta
aatcaaagtcttaaaattcttcccaaagaaccccttatttggattgctgcagcaaggata
gaagagataaaaggacacaacccagaaaaagcaattggtattattaaaaaagcattaaaa
tattttgacaaagaaaatctttctattgaaaaaaatatttggattgacgaaggagtaaaa
tatattaatgaagcaaaagctacattaaaaggaattattgattatataatcgattataaa
gaaaaggatttaatttctttttggagacacatagaacaaacatattcaaatgatacaatt
actaaaatgatttatcaacatgcagtacaagtacaaccccaaaatgatgagttatggatg
gaactcattcgtgtatgtggtaatgatgaaaaagaaattgaagttgtattccaacatgct
attgatgtaatcgacagtgaagaaatatggaaaaaatttgttgaatggtgtatgaaaaga
acaccctctattgcagaatctttattaaaaaagataattgataaaggcaaaggaggtgaa
agtgtatggattggaataattgatctagaattaaatgaaaatcatttacaagaagcattc
aactatgttcgacaaggaataaaaatttgtaaatctatgaaacttattaaaaaaggaatt
aaaatcgctttgtcattaaaagataatgaaaaagaaaatgaaatgattctatctggtgat
tctattgatcctcaaaatgttgacttaatattatttaagataaaaagagagataagaaaa
caaaatattattgatgcaagaaaaatctatgaaaatgctttaaaattaaacgaaacatct
gtaaagttatggattgtagctgctcaatcagagcttcaccaacctggacctttctctgtt
agcaaagctcgaacaatttatgaaaggggaaaaattaaaaatcctacaaatcaagactta
tggatttccttaattcattttgaaagagagaatggaaacaaaaaagtttcagactcatat
ctatcagaaggaataaaggtatgtaagtccaatggaaaattatggaaagaatttatccaa
acatctccaattaacaaaaagaaaactgcttgctctgatgcactaagagcttttgaagga
agagataaagatgttgattatgccaatgtcgtatttgccgttgcagagtttctttataac
actggtaaaaaagaaaaagcagaagaatggttcagaaaagttatttttattgatccaagt
tatggagatgcatggatttggatttacaaaattctttatgaacaaaaaggaaaaattata
gactttgaagaaaagaaaagggattgtattgaaaagtgtggtttgtttgagcataaaaaa
ggattggtatggtctcaggtcaaacgaagaaatgagtcatgtcgatactctattgaagag
atacttgagaaagggagattagttataaattag
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