Entamoeba dispar: EDI_164780
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Entry
EDI_164780 CDS
T01083
Name
(RefSeq) guanine nucleotide-binding protein subunit beta-1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
edi
Entamoeba dispar
Pathway
edi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EDI_164780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
edi03041
]
EDI_164780
Spliceosome [BR:
edi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
EDI_164780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_HPS5
eIF2A
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WDR54
Beta-prop_Nup120_160
Beta-prop_NOL10_N
IF4E
Beta-prop_RIG_1st
WD_LRWD1
Beta-prop_WDR35_TULP_N
Ge1_WD40
WD40_like
Beta-prop_BBS7
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
5886138
NCBI-ProteinID:
XP_001733534
UniProt:
B0ES91
LinkDB
All DBs
AA seq
423 aa
AA seq
DB search
MTTTKEIVPLHMLTTGWTYWFDLGMNQVFSTSGVTATPIYNVHSVEEFWGLYDSIEKQXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGEEFESRRERLRDALAKVGSDQGFPQC
ALTEEKIDQLITKLHYTDGGEELIGIRRWLLVDSLLRAKSRIQEEIHYVEHRYELIHNVG
SMIGDEYRVLRCKVGRKNVITGGADGKVRVWDLNDCSKTRETNVEGQIYSLNFSPIEEAP
IDFVVGTSQGYVKLFAKNEEKPLGIQSHTDRVNAVEFHQSGRFLLTGSHDSMIKLWDLEN
GGCVLKQTGHSGSVRCIGWQRDGGIFASGGNDCIVHLFDIRNGKQIGKYKGHSSTITSLD
WHCNGGVLITASDDNTVKLWDIRMERCGYTIPAHNTIVTSVKLNHQGDFLLTSSFDHSIK
LWS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacaaaggagattgttccacttcatatgttgacaactggttggacgtattgg
tttgacttagggatgaaccaagtattttctacttctggagttactgcaacacctatttat
aatgttcattcagtagaagagttttgggggttatatgacagtattgaaaaacaaannnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttggagaagaatttgagagtcga
agagagagattaagagatgcattagctaaagttggttctgatcaaggatttccacaatgt
gcacttacagaagaaaaaatagatcaattaataactaaattacattacactgatggtgga
gaagaattaattggaataagaagatggttattagttgatagtttacttagggctaaatca
agaattcaagaagaaattcattacgttgaacatagatatgaattaatacataatgttggt
tcaatgattggagatgaatatagagttttacgatgtaaagtaggaagaaaaaatgttatt
acagggggtgcagatgggaaagtaagagtatgggatttaaatgattgttcaaaaacaaga
gaaacaaatgttgaaggacaaatttattcattaaatttttcacctattgaggaagcacca
attgattttgttgtaggaacatcacaaggatatgttaaattatttgcaaagaatgaagaa
aaaccacttggtattcaaagtcatacagatagagtgaatgcagtagagtttcatcaatca
ggaagatttttattaacaggatctcatgattcaatgataaaattatgggatttagagaat
ggagggtgtgtattaaaacaaactggacatagtggatcagtaagatgtattggatggcaa
agagatggtggaatatttgcatcaggaggaaatgattgtattgttcatttatttgatatt
cgaaatggtaaacaaataggaaagtataaaggtcattcatcaacaataactagtttagat
tggcattgtaatggaggagtattaattacagcatctgatgataatactgtaaaattatgg
gatattcgaatggaaagatgtggatatactattccagcacataatactattgttacatca
gtaaaattaaatcatcaaggagatttcttactaacaagtagttttgatcattctattaaa
ctttggtcataa
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