Entamoeba dispar: EDI_174530
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Entry
EDI_174530 CDS
T01083
Name
(RefSeq) ATP-dependent RNA helicase SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
edi
Entamoeba dispar
Pathway
edi03013
Nucleocytoplasmic transport
edi03015
mRNA surveillance pathway
edi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EDI_174530
09122 Translation
03013 Nucleocytoplasmic transport
EDI_174530
03015 mRNA surveillance pathway
EDI_174530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edi03019
]
EDI_174530
03041 Spliceosome [BR:
edi03041
]
EDI_174530
Enzymes [BR:
edi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EDI_174530
Messenger RNA biogenesis [BR:
edi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EDI_174530
Spliceosome [BR:
edi03041
]
Complex C
Other components
EJC/TREX
EDI_174530
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
EDI_174530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
RE_NgoFVII_C
Motif
Other DBs
NCBI-GeneID:
5883835
NCBI-ProteinID:
XP_001738737
UniProt:
B0EKM6
LinkDB
All DBs
AA seq
419 aa
AA seq
DB search
MTDPTMQIPDFVQPETLKMQVEPSNKDTYVGTVSFQEMGLKKEIMQSITDCGFEHPSEVQ
SQVIPKALLRQDVLCQAKSGMGKTAVFVLSILNQGLFLGDHVSAIVVCHTRELARQVQNE
FDRMKKRLVESIGKDIQTASYIGGNPESNDVDDLKNRKPTIIVGTPGRLASLNNSGALDL
SKLDTFVIDECDKILSSKSELDIMSLFMNSSKNKQVMMFSATISEQNKALCRKYLKNPFE
VFIDDGEKLFLHGLHLYSKKLQDMEKQEKLGEILDEIDFNQAIIFADRKERCQAVVQRLK
KEKYPCGILYGRMEEYLREREFERFRKGESRILVSTDLCGRGIDIEKVNLVVNFDMASDS
DQFLHRVGRAGRFGTKGVAISFIDTEEDEKVLGEVQSRFAVQMKELPDDLKEIPSTYYK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccaacaatgcaaattcctgattttgttcaacctgaaacacttaaaatgcaa
gttgaaccatcaaacaaagatacctatgtcggtacagtttcatttcaagaaatgggatta
aaaaaagaaatcatgcaatctattactgattgtggatttgaacatccatcagaagttcaa
tcacaagtaattccaaaagcattgttacgtcaagacgtcttatgccaagctaaatcaggt
atgggtaaaacagctgtttttgttttatcaattcttaatcaaggattgttcttaggagac
catgtttctgctattgttgtttgtcacactcgtgaacttgctagacaagttcaaaatgaa
tttgatagaatgaaaaaaagacttgttgagtcaattggtaaagacattcaaacagctagt
tatattggaggaaatccagagtcaaatgatgtagatgatttaaaaaatagaaaaccaact
attattgttggtactccaggaagattagcatctttaaataattctggagcattagacctt
agtaaacttgatacatttgttattgatgaatgtgataaaattctttcatctaaatctgaa
cttgatatcatgtcattatttatgaactcttcaaagaataaacaagtaatgatgttttca
gcaactatttctgaacaaaataaagctttatgtcgtaaatatttaaaaaatccatttgaa
gtatttattgatgatggagaaaagttattccttcatggtcttcatttatatagtaaaaaa
ttacaagatatggaaaaacaagaaaaattaggagaaatattagatgaaattgatttcaat
caagccattatttttgctgatcgtaaagaacgttgtcaagctgttgttcaacgattaaag
aaagaaaaatatccatgtggtattctttatggtaggatggaagagtatttaagagaaaga
gaatttgaacgattcagaaagggtgaaagtagaattttagtttcaactgatttatgtgga
agaggtattgatattgaaaaagttaatttagttgttaactttgatatggcctcagactct
gaccagttcttacacagagtaggaagagctggaagatttggaacaaaaggagttgctatt
tcatttattgatactgaagaagatgaaaaagttttaggtgaggttcaatctagatttgca
gtacaaatgaaagaattaccagatgatttgaaagaaattccatccacatattacaagtaa
DBGET
integrated database retrieval system
