Entamoeba dispar: EDI_202910
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Entry
EDI_202910 CDS
T01083
Name
(RefSeq) Cleavage and polyadenylation specificity factor subunit
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
edi
Entamoeba dispar
Pathway
edi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EDI_202910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
edi03021
]
EDI_202910
03019 Messenger RNA biogenesis [BR:
edi03019
]
EDI_202910
Transcription machinery [BR:
edi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EDI_202910
Messenger RNA biogenesis [BR:
edi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EDI_202910
U7-dependent histone pre-mRNA processing factors
EDI_202910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
hNIFK_binding
Motif
Other DBs
NCBI-GeneID:
5886509
NCBI-ProteinID:
XP_001733549
UniProt:
B0ETB6
LinkDB
All DBs
AA seq
736 aa
AA seq
DB search
MSTTVILDNEIQSTLINGNYLEIRPLGAGREVGRSCFILKYMGHNIMLDCGVHPAKPHGE
AALPLFEHADIDSIELLCVTHYHVDHCASLPYLILERQFKGKVLMTPPTKEIFGELFKEF
HQMSSTIQPPKSVNPKEVMDRIDTIKFHELQEYNGMKIWCFNAGHILGAAMFCIEINGVK
ILYTGDFSGETDRHLQAAEVPPFQIDVMMCESTYGIIEQESRIDRENAFIRQIMEILKRG
GKCLIPVFSLGRAQEFELILEEYWQNHKDLWSVSIFFFSSIAKKCTTYFEKFTSFMNQDL
RKKTKQAFDFKFIREGSSSVDDGAIDYKPCVVMASPGMLQDGISRKIFERWCTDKKNGVI
IPGYCVEGTLAKDLILDSTKPFINSEGDQVIPKCSVTEISFCAHSDFAHTRKFIGNVKPK
HLVLIHGEGKSMEQLHNALKKEYPELNIYMPCNTQPIKIPIQPKHEVRLLGEIASNILKM
EEDNKDKEIIFNAVYLQNTKDVDTVVVKAKDVERFSSFHSNEIYQHLYFPCLIPXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKKDRPRKIPQLEDVSLDLVLDLLSNKFESA
MVLKSKDDVQKAYDNINQINKDLITKNEQQKDEQQKEEIKEETNKGEVKVEQQKDENKNE
QDKDETNQKSLKEIVKKETEEEFCIKENVPYILIHENSNSVLVEWPSLTPFGFDKDLLKR
LNNVLPKILLTMKNTF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaccgttattttagataatgaaattcaaagcactttgattaatggtaattat
ttggaaattcgtcctcttggagctggaagagaagttggtaggtcttgttttatattaaaa
tatatgggtcataatattatgttagactgtggtgttcatcctgcaaaaccccatggagaa
gcagcacttcctttatttgaacatgcagatattgattctattgaattattatgtgttaca
cattatcatgttgatcattgtgcgtcattaccatatcttatattagaaagacaatttaaa
ggaaaagtactaatgacccctccaactaaagaaatttttggtgagctctttaaagaattc
catcaaatgtcatcaacaatacaaccaccaaaatccgttaatccaaaagaagtaatggat
agaatagatacaattaaatttcatgaactacaagaatataatggaatgaaaatatggtgt
tttaatgctggtcatatccttggagctgcaatgttttgtattgaaattaatggagtaaaa
atattatatactggagatttttctggagaaactgataggcatttacaagctgcagaagta
ccaccatttcaaatagatgtgatgatgtgtgaaagtacatatggtattattgaacaagaa
tcacgaatagatcgtgaaaatgcatttattcgtcaaattatggaaatattaaaacgagga
ggaaaatgtttaattccagtattttcattaggaagagctcaagagtttgaacttatatta
gaagaatattggcaaaatcataaagatctttggtcagtttcaatttttttcttttcatca
attgcaaaaaaatgtacaacatattttgaaaagtttacatcatttatgaatcaagactta
agaaagaaaacaaaacaggcatttgattttaaatttattagagagggtagttctagtgtt
gatgatggagctattgattataaaccatgtgtagtaatggcatctcctggaatgttacaa
gatggtatctctagaaagatatttgaaagatggtgtactgataaaaagaatggagttatt
attcctggatattgtgttgaaggaacattagcaaaagacttaattttagatagtacaaaa
ccatttattaattcagaaggagatcaagttattccaaaatgttcagtaactgaaataagt
ttttgtgctcatagtgactttgctcatactcgtaaatttattggtaacgtcaaaccaaaa
caccttgttcttattcacggagaaggtaaatcaatggaacaattacataatgcattaaaa
aaagaatatccagaacttaatatttatatgccttgtaatactcaaccaattaaaattcct
attcaaccaaaacatgaagttagattattaggtgaaattgcatcaaatattttaaaaatg
gaagaggataataaagataaagagataatttttaatgctgtttatttacaaaatacaaaa
gatgttgatactgttgttgtaaaagcaaaagatgttgaaaggttttcttctttccattct
aatgaaatatatcaacatttatattttccttgtttaataccacnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnntagtgaaaaaaaagatcgtccaagaaaaattcctcaa
cttgaagatgttagtcttgatttagtacttgatcttttatcaaataaatttgaatctgcc
atggttttaaaaagtaaagatgacgtccaaaaagcatatgataatattaatcaaataaac
aaagatttaatcacaaaaaatgaacaacagaaagacgaacaacagaaagaagaaattaaa
gaagaaacaaataaaggtgaagttaaggttgaacaacaaaaagatgaaaataaaaatgaa
caagataaagatgaaaccaatcaaaagagtcttaaggaaattgttaaaaaagaaacagaa
gaagagttttgtattaaggaaaatgtgccttatattttaattcatgaaaattcaaattct
gttttagtagaatggccatcacttactccttttggattcgacaaagacttattaaaaagg
ttgaataatgttttaccaaaaattttgttaacaatgaaaaacacattttaa
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