KEGG   Entamoeba dispar: EDI_208060
Entry
EDI_208060        CDS       T01083                                 
Name
(RefSeq) lsm1
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
edi  Entamoeba dispar
Pathway
edi03018  RNA degradation
edi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:edi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EDI_208060
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EDI_208060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:edi03019]
    EDI_208060
   03041 Spliceosome [BR:edi03041]
    EDI_208060
Messenger RNA biogenesis [BR:edi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     EDI_208060
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     EDI_208060
Spliceosome [BR:edi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    EDI_208060
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 5885168
NCBI-ProteinID: XP_001740010
UniProt: B0EPF1
LinkDB
AA seq 94 aa
MSLVKEYINKKVEVITTLGKVYIGILTGYDNPMNIVLKNSVERTFSKEGVSNISCGLLIL
RGDEIMVIGGLNEEKDNQLDWQCVVSNPLSQALI
NT seq 285 nt   +upstreamnt  +downstreamnt
atgtcacttgttaaagagtacatcaacaaaaaagtagaagtaataactactttaggtaaa
gtgtatattggtattttaactggatatgacaatcctatgaatattgtattaaaaaattca
gtagaacgtacattctctaaagaaggagtttcaaatatatcgtgtggattattaattctt
cgtggtgatgaaattatggttattggaggattaaatgaagaaaaagataatcaacttgac
tggcaatgtgtagtttccaacccactttctcaagcattaatatag

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