Entamoeba dispar: EDI_208060
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Entry
EDI_208060 CDS
T01083
Name
(RefSeq) lsm1
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
edi
Entamoeba dispar
Pathway
edi03018
RNA degradation
edi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EDI_208060
09123 Folding, sorting and degradation
03018 RNA degradation
EDI_208060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edi03019
]
EDI_208060
03041 Spliceosome [BR:
edi03041
]
EDI_208060
Messenger RNA biogenesis [BR:
edi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EDI_208060
mRNA degradation factors
5'-3' decay
Lsm complex
EDI_208060
Spliceosome [BR:
edi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
EDI_208060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
5885168
NCBI-ProteinID:
XP_001740010
UniProt:
B0EPF1
LinkDB
All DBs
AA seq
94 aa
AA seq
DB search
MSLVKEYINKKVEVITTLGKVYIGILTGYDNPMNIVLKNSVERTFSKEGVSNISCGLLIL
RGDEIMVIGGLNEEKDNQLDWQCVVSNPLSQALI
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgttaaagagtacatcaacaaaaaagtagaagtaataactactttaggtaaa
gtgtatattggtattttaactggatatgacaatcctatgaatattgtattaaaaaattca
gtagaacgtacattctctaaagaaggagtttcaaatatatcgtgtggattattaattctt
cgtggtgatgaaattatggttattggaggattaaatgaagaaaaagataatcaacttgac
tggcaatgtgtagtttccaacccactttctcaagcattaatatag
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