KEGG   Entamoeba dispar: EDI_219540
Entry
EDI_219540        CDS       T01083                                 
Name
(RefSeq) protein SOF1
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
edi  Entamoeba dispar
Brite
KEGG Orthology (KO) [BR:edi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:edi03009]
    EDI_219540
   04121 Ubiquitin system [BR:edi04121]
    EDI_219540
Ribosome biogenesis [BR:edi03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    EDI_219540
Ubiquitin system [BR:edi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     EDI_219540
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Sof1 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR41 WD_LRWD1 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 5885451
NCBI-ProteinID: XP_001740288
UniProt: B0EQ92
LinkDB
AA seq 456 aa
MTEPQGFDPTKFKIITRNVLTEYKELPNDLARVQRSMKEEDHPFAQAREYKRALNATKLD
KIFAKPFIGNLAGHPDGVTCITRTGNEISYMASGGYDGEVRVWNVGTKQCLYNIQAHDTV
CKGISVSTTKIPYIVTCSTDHTCKLWPLSISTEEDSKPAKVNAPLMTYNHELPFSCIDTR
RGTEDFCTGTSEGLDLWTFNRNEIVQHYDTETDGVLGCKISPTENNVVGITGGNRSIILI
DLRANTPIKTVYGVRRYNDLSWNPQQVYMFTACSDDWNLYTYDIRKLNEARTIHKGHLGP
VLTVDYSPTGREFTTGSYDKCIRIYNEWCGYARDCYHTQRMQKVFNVCYSGDGHYIFSGS
DEGNIRIWKAFASESTKIKDKREIAKLNYLNGLKKKYKDMPEIRRIANHIHLPKELMHTK
TIRDTMILSEKKKELNRMKHAKKQRKTIKEKEENKN
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgacagaaccacaaggctttgatcccacgaaatttaaaataattacacgaaacgttctt
acagaatacaaagaattaccaaatgacttagcacgtgttcaacgttcaatgaaagaagaa
gatcatccatttgcacaagcacgagaatataaacgagcattaaatgcaacaaaattagat
aaaatatttgctaaaccatttatagggaatttagcaggacatccagatggagtaacatgt
ataactcgaacaggaaatgaaatatcatatatggcaagtggaggatatgatggagaagta
agggtatggaatgttggaacaaaacagtgtttgtataatattcaagcacatgatactgtt
tgtaaagggattagtgtttctacaacaaaaataccatatattgttacatgttcaacagat
catacatgtaaattatggccattatcaatttctacagaagaagatagtaaaccagcaaaa
gtaaatgcaccattaatgacatataatcatgaattaccattttcatgtattgatacaaga
agaggaacagaagatttttgtacaggaacaagtgaaggacttgatttatggacatttaat
agaaatgaaattgtacaacattatgatacagaaacagatggagttttaggatgtaaaatt
agtccaacagaaaataatgttgttggaataacaggaggaaatcgaagtattatattaatt
gatctacgagcaaatacaccaattaaaacagtctatggagtaagaagatataatgattta
tcatggaatccacaacaagtatatatgtttactgcatgtagtgatgattggaatctttat
acttatgatataagaaaacttaatgaagcacgtacaattcataaaggacatcttggacca
gtacttacagtagattattcacctacaggaagagaatttactacaggatcatatgataaa
tgtattagaatttataatgaatggtgtggatatgcaagagattgttatcatacacaaaga
atgcaaaaagtatttaatgtttgttatagtggagatggacattatatatttagtggatca
gatgaaggaaatattagaatatggaaagcatttgcaagtgaatcaactaaaattaaagat
aaaagagaaattgctaaacttaattatcttaatggattaaaaaagaaatataaagatatg
ccagaaattcgaagaatagcaaatcatattcatcttcctaaagaattaatgcatacaaaa
acaattagagatacaatgattcttagtgaaaagaagaaagaattaaatagaatgaaacat
gctaaaaaacaaagaaaaacaataaaagagaaagaagaaaataaaaattga

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