Entamoeba dispar: EDI_226120
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Entry
EDI_226120 CDS
T01083
Name
(RefSeq) DNA mismatch repair protein MsH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
edi
Entamoeba dispar
Pathway
edi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EDI_226120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edi03400
]
EDI_226120
DNA repair and recombination proteins [BR:
edi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EDI_226120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
UCH
Motif
Other DBs
NCBI-GeneID:
5882345
NCBI-ProteinID:
XP_001737309
UniProt:
B0EGD0
LinkDB
All DBs
AA seq
630 aa
AA seq
DB search
MEEVTIDNGMIIEEEAIEGLHLFGDKKEMTLFKHLNRTHTKIGEKMIKEWIRQPLIDKDK
INKRLELVEGFYENSEIRLKIKNEELAIMPDLEKLIKGINKSDLESIVKLYEAVRISKSI
KEELKEMNNKEIEKEIIEPLERISEEMEKFEEMVVTLIDIEETKNHVFKIREDFDEGLQK
IRENHKKVEELFEKCLEQAANDLNIKTDKIKIIEHNNNLILRVSKSNEKEVKKNKKYTII
QTLKGECKFTFKEMQTLNVKRDKLNLKEEEINKKFIEEINKVIEGYKETFKELENIIGYI
DCIQSFATVSNDNNQGYAKPRIYESEKGIIKIKKARHPLIENNSINTFIENDIDINRKET
RFQIITGPNMGGKSTYLRMIGLCVIMAQIGMFIPCSEADISICDKIMCRIGAGDNIVEGM
STFMSEMKDTSEIIKKSTKNSLVLIDELGRGTSTYDGFGIAWGISEYLAIDIGCYCVFAT
HFHEITGLEKRVNGVINKHVEADIIDKQLVLKYKIKNGSTDQSLAIYVAEWADFPHEVVE
SAKRKAKELDLDQPDSKKKIEIFTNKIPLLNDEIPQITPDDIVKGKSIINNFIHEYKSTS
SDQLISLQNKYYQLLLSNPFLKQLEQISLK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagttacaatagacaatggaatgataattgaagaagaagctattgaaggactt
cacttgtttggagataaaaaagaaatgacactatttaaacatttaaatagaacacataca
aagataggagaaaagatgataaaagaatggattagacaaccattaatagataaggataag
ataaataaacgactagaattagtagaagggttttatgagaactcagagattcgattaaaa
atcaaaaatgaagaattagcaataatgccagatttagagaagttaataaaagggataaat
aaaagtgatttagaaagtattgtcaaattatatgaagcagtaagaattagtaaaagtatc
aaagaagaattaaaagaaatgaataacaaagaaatagaaaaagaaataatagaaccatta
gaaagaatttcagaagaaatggaaaaatttgaagaaatggtagtaacacttattgacatt
gaagaaacaaaaaatcatgtatttaaaataagagaagactttgatgaaggacttcaaaaa
ataagagaaaatcataaaaaagtagaagaactttttgaaaaatgtttagaacaagcagca
aatgatcttaatattaaaacagataaaattaaaataattgaacataataataatttaata
ttaagagtatctaaaagtaatgaaaaagaagttaaaaagaataaaaagtatactattatt
caaacacttaaaggagaatgtaaatttacatttaaagaaatgcaaacacttaatgttaaa
agagataaacttaatttaaaagaagaagaaattaataaaaaatttatagaagaaattaat
aaagtaattgaaggatataaagaaacatttaaagaattagaaaatattattggatatatt
gattgtattcaatcatttgctacagtttctaatgataataatcaaggatatgctaaacca
agaatatatgaaagtgaaaaaggaattattaaaattaaaaaagcaagacatccattaatt
gaaaataatagtataaatacatttattgaaaatgatattgatattaatagaaaagaaaca
agatttcaaattattacaggaccaaatatgggaggaaaatcaacatatttaagaatgatt
ggattatgtgttattatggcacaaattggaatgtttattccatgttcagaagcagatatt
tctatttgtgataaaataatgtgtagaataggagcaggtgataatattgttgaaggaatg
agcacatttatgtcagaaatgaaagacacatcagaaattattaaaaaatcaacaaaaaat
tcattagttcttattgatgaattaggtagaggaacatcaacatatgatggatttggaatt
gcttggggaatttcagaatatttagctattgatattggatgttattgtgtttttgcaacc
cattttcatgaaattacaggattagaaaaaagagtaaatggtgttataaataaacatgtt
gaagctgatattattgataaacaacttgtattaaaatataaaattaagaatggaagtact
gatcaaagtttagcaatttatgttgctgaatgggctgatttccctcatgaagttgttgaa
tcagcaaaaagaaaagcaaaagaacttgatttagatcaacctgattctaaaaagaaaatt
gaaatctttactaataaaatccctcttttaaatgatgaaattccacaaatcactcctgat
gatattgttaaaggaaagtctattatcaataattttattcacgaatataaatctacttct
tctgatcaattaatttctcttcaaaataaatattatcaattacttctttcaaatcctttt
ttaaaacaacttgaacaaatttcactgaaataa
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