Entamoeba dispar: EDI_248550
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Entry
EDI_248550 CDS
T01083
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
edi
Entamoeba dispar
Pathway
edi03020
RNA polymerase
edi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EDI_248550
09124 Replication and repair
03420 Nucleotide excision repair
EDI_248550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
edi03021
]
EDI_248550
03400 DNA repair and recombination proteins [BR:
edi03400
]
EDI_248550
Enzymes [BR:
edi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EDI_248550
Transcription machinery [BR:
edi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
EDI_248550
DNA repair and recombination proteins [BR:
edi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EDI_248550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Endotoxin_N
Motif
Other DBs
NCBI-GeneID:
5882251
NCBI-ProteinID:
XP_001737225
UniProt:
B0EG45
LinkDB
All DBs
AA seq
1170 aa
AA seq
DB search
MQANLPSQQIQPDQFWYLIDAHFKENGLVKQQLSSYNNFIKKVRDVITSDTTKIEISNAE
VLGISANDEEEHTIVLTDPIFHFPKVSTGSKASASLFPHEARLRSLTYACQLEVKAKDTI
RKNGTEEITTVPKIDIASIPSMLKSDVCRLKRCVTQPSMISKDECSFEQGGYFIIKGSEK
VVIAQEKMAPNTVLVFEGSDQLKYPYEGNINSLASNDEVRTHKIRMDYPKLDKSRLKIKV
PVLTLSRMDCDVPVVLLFVALGYENDQKIVEAICFDENDNEMYNIVTTAIQANECTTTED
ARRWLGEHSKKTNKEGVIEIVSENIQKLQRDGTEKLKKDLLPHIGTDNFESKAQFLGYMT
NHFLSVYTGKRNGDDRDHLARKRMLMTGGLMMELFKNSLKRMMKTARAQLQKQLSSNKTL
EYAKPLSFPTITSDFTKALGTGNWPQPGGKESRHGVAQVLSRLTFTSALAYLRKISSPVE
GKRKTQKPRQLHNTQWGYICPAETPEGESCGLVKMLSLMAQITVALQDEQVDEIKEALDC
QYVCNINDCTGEKMNNITKVFLNGVWLKCSEQPQKLLEELKNYRKNSTKGKVKKVMSMVL
DQLHKELRIYTDAGRCTRPLFTVSNNNGHYTLNLKQSQITELCSRLDNESNGTEKTKFWN
NFLSKGIIEYVDADEEEMSMIAMFPSDLDNTEGGSSKNYTHCEIHPALVMGVLGSIIPFP
DHNQSPRNTYQCAMGKQAIGVYASNYQLRLDSLGHVLFYPQKPLVSTRAAEYVKFGHIPA
GINAIVAVCCYSGYNQEDSVMMNQGSIDRGLFRSMAFKTFSEDAKKSETTELMFFKPSEN
NSEITEDISKYEKVDVDGILAPGTKVKPDDILVAGFYENKNKTLKDCSLRYKPRENGVVD
QVVVTNAQSGTKYIRVKMRSIRIPQIGDKFSSRHGQKGTVGMTYRQEDMPFTIEGISPDI
IMNPHAIPSRMTVGQLVECLLGKVGALVGDVQSGTPFQKDITVDKIGERLHKLKYQRRGY
EALFSGHTGRKLDSLVYIGPTYYQRLKHLVDDKVHGRATGPYATLTRQPLEGRSRDGGLR
LGEMERDCMISHGVSSLLKERLFLASDKYQIYVCDKCHMPAVANHKACTFQCSCCKDKTH
ISKVDIPYACKLLFQELMSMAVCPRIYTEV
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaatcttccctcacaacaaattcaacctgatcagttttggtatttaattgat
gctcattttaaagaaaatggtttagtaaaacaacaattgtcatcatataataatttcatt
aaaaaggtaagggatgttattacaagtgatactacgaaaattgaaataagtaatgcagaa
gttttagggataagtgccaatgatgaagaagaacatacaattgtattaacagatccaatt
ttccattttccaaaagtttctactggttctaaggcaagtgcttctttattccctcatgaa
gctagattaagaagtttaacatatgcttgtcaacttgaagtaaaagctaaagacacaata
agaaaaaatggaacagaagaaattacaactgtacctaaaattgatatagcaagtattcca
tctatgttaaaatctgatgtttgtagattaaaaagatgtgtaacacaaccatctatgatt
agtaaagatgaatgttcatttgagcaaggtggatattttattattaagggaagtgaaaaa
gtagttattgcacaagaaaaaatggcaccaaacacagttttagtttttgaagggagtgat
caattaaaatatccatatgaaggaaatattaatagtttagcatctaatgacgaagttaga
acacataaaattcgaatggattatccaaaattagataaatcaagacttaaaattaaagta
cctgttttaactcttagtcgtatggattgtgatgttccagttgtattactttttgttgca
ttaggatatgaaaatgatcaaaaaatagtagaggctatttgttttgatgaaaatgataat
gaaatgtataatattgttactactgctattcaagcaaatgaatgtacaactacagaagat
gcaagaagatggcttggagaacattcaaagaaaacaaataaagaaggagtaattgaaatt
gtatcagaaaatatacaaaagttacaaagagatggaacagaaaaattaaaaaaagattta
cttccacatattggaacagataattttgaatcaaaggcacaatttttaggatatatgaca
aatcacttcttatcagtttatacaggaaaaagaaatggagatgatagagatcatttagca
agaaaaagaatgttaatgacgggaggattaatgatggaattatttaagaattcattaaaa
cgtatgatgaaaacagcaagggctcaattacaaaaacaattatcaagtaataaaacatta
gaatatgctaaaccactttcatttccaacaattacatcagattttacaaaagcattagga
acaggaaattggccacaaccaggaggaaaagaatcaagacatggggtagcacaagtatta
agcagattaacatttacatcagcattggcatatttaagaaaaatttcatcaccagttgaa
ggaaaaagaaaaacacaaaaaccaagacaattacataatacacaatggggatatatttgt
ccagctgaaacaccagagggagagtcatgtgggttagttaaaatgttatcattaatggca
caaattactgttgctttacaagatgaacaagttgatgaaattaaagaagcattagactgt
caatacgtttgtaatattaatgattgcactggagaaaaaatgaataatattactaaagtc
tttttaaatggagtatggttaaaatgttctgaacaaccacaaaaattattagaagaatta
aagaattatagaaagaatagtacaaaaggaaaagtaaaaaaagtaatgtctatggttctt
gatcaacttcataaagaattacgtatttatactgatgcaggtagatgtacaagaccatta
tttacagtaagtaacaataatggacattatacattaaatttaaaacaaagtcaaattaca
gagttatgtagtagattagataatgaaagtaacggaacagaaaaaacaaagttttggaat
aatttcttatcaaaaggaattattgaatatgtagatgctgatgaagaagaaatgtctatg
attgctatgttcccatcagatttagataatacagaaggaggttcaagtaaaaattatact
cattgcgaaattcatccagcattagttatgggagtattaggttctattattccattccct
gatcataatcaatctcctagaaatacatatcaatgtgctatgggtaaacaagcaattgga
gtatacgcatcaaattatcaattaagattagattcattaggacatgtccttttttatcca
caaaaaccattggtatcaacaagagcagctgaatatgtcaaatttggacatattccagca
ggaattaatgctattgttgctgtttgttgttattcaggttataatcaagaagatagtgtt
atgatgaaccaagggtcaattgatagaggattgttcagatcaatggcatttaaaacattt
agtgaagacgctaaaaaatcagaaacaacggaattaatgttctttaaaccaagtgaaaat
aattcagaaattactgaagacattagtaaatatgaaaaagttgatgttgatggtatttta
gcaccaggaactaaagttaaaccggatgatattttggttgctggattttatgaaaataaa
aataaaacattaaaagattgttcattaagatataaaccaagagaaaatggagttgttgat
caagttgttgttacaaatgcacaatcaggaacaaaatatattagagttaaaatgagaagt
ataagaattccacaaattggagataaattctcttcaagacatggacaaaaaggaacagtt
ggtatgacctatagacaagaagatatgccatttactattgaaggaatttcaccagacatt
attatgaatcctcatgctattccatctcgtatgacagttggacaattagtagaatgttta
cttggaaaagtaggtgcattagtaggagatgtacaaagtggtacaccattccaaaaagat
ataacagttgataaaattggagaaagactacataaattaaagtatcaaagaagaggatat
gaggcattatttagtggacatactggtagaaaattagatagtcttgtttatattggacca
acatattatcaacgattaaaacatcttgtagatgataaagttcatggaagagcaactgga
ccatatgctacactaacaagacaaccactagaaggaagatctagagatggtggattacgt
ttaggggagatggagagagattgtatgatttcacatggtgttagttctttattaaaagaa
agattattccttgcatctgataagtatcaaatttacgtttgtgacaaatgtcatatgcca
gcagtcgcaaaccataaagcatgtacattccaatgttcttgttgtaaagataaaactcat
atttcaaaagttgatattccatatgcctgcaaattattattccaagaattaatgtcaatg
gcagtttgtcctagaatttatactgaagtttaa
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integrated database retrieval system
