Entamoeba dispar: EDI_271960
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Entry
EDI_271960 CDS
T01083
Name
(RefSeq) ATP-dependent RNA helicase DBP4
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
edi
Entamoeba dispar
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
edi03009
]
EDI_271960
Enzymes [BR:
edi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EDI_271960
Ribosome biogenesis [BR:
edi03009
]
Eukaryotic type
90S particles
Helicases
EDI_271960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
5882079
NCBI-ProteinID:
XP_001737060
UniProt:
B0EFJ8
LinkDB
All DBs
AA seq
697 aa
AA seq
DB search
MEQKQKKHTHFKKAKKSSDKQIITNKTKKRENKKPFSIKPKILERQKIEEEINELNLRIR
KETPPRGVNPILSESKIGEDYSISYPDAKRFDQFPISKSTIQLLKKNQFITMTPIQRAAI
PHALAGRDIIGAARTGSGKTLAFLIPLIEFMYRSRWTELDGLCSIILSPTRELAQQIFDV
FASITGERFTAALITGGKDTKEEAKVIRLMNVLICTPGRLLYHLDNTPHFNTTPLRILIL
DEADRILDMGFKKDLTAILEHLPKQRQTMLFSATQTKSVQDLIRLSLRHPEYISVDEKAQ
YATPESLNQTYMLLGDGDKINVLFSFIRTHTNSKMIVFFQTTKEVRFFFETFKKLRVGAV
LYLLYGRQSQNSRNEQLSTFTKEKRGILFCTDIASRGLDIQGVDWIVQYDCPEDTAQYIH
RVGRTARLNHNGQALLLLTHNEQAFIEQLEKAKVPLNRVEPNIARMKNIANDITELMIEL
PIIKHYAEKSIDAYIYSLTKMHNKTVFDSEKVDEKAMRQSYGLFADKLEETNKEDHIKFE
DDDDDVVEEAATKAEEEEEDDDDDLLEKADEQIIEEVKPKQFDISIKPKRLTKKAIHSVG
TYIKFEDSDNEQDDQNDLVEKMEEEMRVADIEDKETAKKELKIKRMKKQSALTGFADVEI
ADDRKRKISLTESMKEPKTKKTAEEMLQEKLKGNSLL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaagcaaaagaaacatactcatttcaaaaaagcaaagaaatcatctgacaaa
caaattataaccaataaaacaaaaaaaagagaaaacaagaaaccattttcaattaaacca
aaaattcttgaacgacaaaaaattgaagaagaaattaatgaattaaatttaagaataaga
aaagaaacaccaccaagaggagttaatccaattttaagtgaatctaaaataggagaagat
tattctattagttatcctgatgctaaaagatttgatcaatttcctattagtaaatcaaca
attcaacttcttaagaaaaatcaatttattacaatgacaccaattcaaagagctgctatt
ccacatgcattagctggaagagatattattggagctgcaagaactggaagtggaaaaaca
ttagcatttttaattccacttattgaatttatgtatcgttcacgatggactgaattagat
ggattatgttcaattattttatcaccaacaagagaattagcacaacaaatatttgatgtt
tttgcttctattacaggagaacgttttactgctgcattaattacaggtggaaaagataca
aaagaagaagctaaagttattagattaatgaatgttttaatttgtacacctggtagatta
ctctatcatttagataatacacctcattttaatacaacacctttaagaatattaatttta
gatgaagcagataggattcttgatatgggatttaagaaagatcttacagcaatattagaa
catcttcctaaacaaagacaaacaatgttattttctgcaacacaaacaaaatctgttcaa
gatttaattcgtttatcattaagacatccagaatatatttctgttgatgaaaaagcacaa
tatgcaactccagaatcattaaatcaaacatatatgttacttggtgatggtgataaaatt
aatgttttattttcatttattagaacacatactaattctaaaatgattgttttcttccaa
acaacaaaagaagttcgatttttctttgaaacattcaaaaaattaagagttggagcagtt
ttatatttattatatggtcgtcaatcacaaaatagtagaaatgaacaattaagtacattt
acaaaagaaaagagaggtattttattttgtactgatattgcatctcgtggattagacatt
caaggagtagattggattgttcaatatgattgtcctgaagatacagctcaatacatccat
agagttggaagaacagcacgtttaaatcataatggtcaagcattattattacttacacat
aatgaacaagcatttatcgaacaattagaaaaagctaaagtaccattgaatagagtagaa
ccaaatattgcacgaatgaagaatattgctaatgatatcactgagttaatgattgaactt
ccaattattaaacactatgctgaaaagagtattgatgcatatatttatagtctaacaaag
atgcataacaaaactgtttttgattctgaaaaagttgatgaaaaagcaatgagacaatct
tatggattatttgctgataaattagaagaaacaaacaaagaagatcatattaaatttgaa
gatgacgatgacgatgttgtagaagaagctgctacaaaagctgaagaagaagaagaagat
gatgatgatgatctattagaaaaagcagatgaacagattattgaagaagtcaaaccaaaa
caattcgatatttcaattaaaccaaaacgattaactaagaaagcaattcactcagttgga
acatacatcaaatttgaagactctgataacgaacaagacgaccaaaatgacttagttgaa
aagatggaggaagaaatgagagttgctgatattgaagataaagaaactgcaaagaaagaa
ttgaaaattaaacgaatgaaaaaacaaagtgcactaactggatttgcagacgttgaaatt
gctgacgacagaaaaagaaagattagtcttactgaatcaatgaaagaaccaaaaacaaag
aagacagcagaagaaatgttacaagaaaagttaaaaggaaattcattactttaa
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