Entamoeba dispar: EDI_278500
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Entry
EDI_278500 CDS
T01083
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
edi
Entamoeba dispar
Pathway
edi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EDI_278500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
edi03019
]
EDI_278500
Messenger RNA biogenesis [BR:
edi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EDI_278500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF5547
Motif
Other DBs
NCBI-GeneID:
5881143
NCBI-ProteinID:
XP_001736162
UniProt:
B0ECY7
LinkDB
All DBs
AA seq
227 aa
AA seq
DB search
MEEVIKRGDGREANEIRATTIKIGVISGAKGSCLIQKENSKVISSVQIKTQDESIDFEFT
VKVTFAQFENNSLFNNRKEIELQEILTQSLTSRINQESNKGKIICLQVFVMEQDGSVEDS
IINSSSLALFDAEIQMDSIIIATTVVKLPIYNQVIVDPTAFEEEKKEGSVLIACIPSNSS
ITQIYMSGVLDPQDISSCLSIALDSCWKLNKEIELIIQSKKVKMIEH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttatcaaaagaggtgatggaagagaggcaaatgaaattcgtgcaacaaca
atcaaaattggagtaattagtggagcaaaaggaagttgtttaatacaaaaagaaaatagt
aaagttatatcatctgtacaaatcaaaacacaagacgaatcaatagattttgaatttaca
gtaaaagtgacatttgcccaatttgagaataatagtctattcaacaatagaaaagaaatt
gaacttcaagaaatcttaacacaatcattaacttctcgtattaatcaagaaagcaataaa
ggaaaaattatttgtttacaagtatttgttatggaacaagatggaagtgttgaagatagc
ataatcaattctagttcattagcactatttgatgcagaaattcaaatggatagcattatt
attgcaacaacagttgttaaattgccaatatataatcaagttattgttgatccaacagca
tttgaagaagagaaaaaagaaggatcagttctaattgcatgtattccatctaattcttct
atcactcaaatttatatgagtggggtattagacccacaagatatttctagttgtctttct
attgcattagatagttgttggaaattaaacaaagaaatagaattaattatacaatcaaaa
aaagttaagatgattgaacattaa
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