KEGG   Entamoeba dispar: EDI_287870
Entry
EDI_287870        CDS       T01083                                 
Name
(RefSeq) DNA damage-binding protein
  KO
K10610  DNA damage-binding protein 1
Organism
edi  Entamoeba dispar
Pathway
edi03420  Nucleotide excision repair
edi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:edi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    EDI_287870
  09124 Replication and repair
   03420 Nucleotide excision repair
    EDI_287870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:edi04121]
    EDI_287870
   03400 DNA repair and recombination proteins [BR:edi03400]
    EDI_287870
Ubiquitin system [BR:edi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     EDI_287870
DNA repair and recombination proteins [BR:edi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      EDI_287870
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      EDI_287870
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_2nd Beta-prop_RSE1_1st TrmI-like_N
Other DBs
NCBI-GeneID: 5884556
NCBI-ProteinID: XP_001739420
UniProt: B0EMP6
LinkDB
AA seq 1088 aa
MADRKFYLTTVAPSTSITHALVAKLNQPDEQYLVIVKNTIVNVYQLTTTGLDLVYTKQFP
YSVSFITKYQSKGRNSKDYLIFVTNNQQLVIAQLNDNKELSLVYSNNIEDRLGRTAFYGI
SGVVISNSHLLLHLYNHLIKIIPLPREEENLPEAPFNLRIDEQRVVGLYCLQLDQKQVIG
IHHEIKNDIKVITFYEFNIESKTLNLYNKQIEDTSNIDLFIPYLGNEGYFKINSQTVSFV
PNSNQISSVSMRPIHLETYCFLDEKRLLLSDNKGKMHLITLKENNKHEIELYYYPLEYQA
LTIPSTILYLDNSVLFWGSKGGDSHLIKINEKRCEILETFENRGPILDMTAIHDEITNKD
DLLMCCNTYQQGTLKLISSGVGIDIICQNEMKGITHLYQVEMGNKEYLIISYSDNSKVFE
SQQENNQLQFNEIEIKGFNRKEETICSGIIEIGEMKEICFVQVTREEVNIFDSEQLKLIQ
QIRVNKFISHSCIYDEKLYISQSNEINVLNEKKEIKHIYSGENDISAFTIGKEGTEDVIG
ICYWDSNKMEIIKLENGNKNHIREINGNIYGKSIEIINNKEGMYIVIGMGDGRVLVYQME
ELMEIEGEITKNYKVLDIGLSGIELKTLEINGMKYIMCLCDRPTLVSIYKGKIKTLSVNC
SEIVSIVPFKMKECMNSLIVATKENIIIGNIEEIQSIHTKSLSIGVFISRIVISKQENKA
LLLSSEIKELKEKRIESHSIKLIDFRKMEIEDSHELKENEHALSIEEIVVDEKEMFVIGT
AFAKPNEVEPSSGRILIVQIKDGKLEIVFEKDVNGAVYSIKTLLKKYLAMSIEKKLVIFE
YQRIITNGEFEVKLQEKGSCNVKLIGLYVKTMGNKILVGDLMKSISVYSFDNNGNNKNCL
NEVSRDFYASYTTAIEFVDENCYLSSDSNSNLLVFNTNSTGNESERFRLNNCAHIHVGEC
INVMCKGSIAPTHSTYETIQKKCILFGGVTGYIGGICEIPNEIYDILIKVQNQILLQMKG
IVECTTPDEWKKVIDDWKRMPSSNIIDGNIVESYLEMSKEKQCEIAHLSGVNEEQINDII
ENMISLFH
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggctgatcgtaaattctatttaacaacagtagcaccttctacttctattactcatgca
ttagttgccaaactcaatcaaccagatgaacaataccttgttatagtaaaaaatactata
gttaatgtatatcaattaacaacaacaggtcttgacttagtttacacaaaacaatttcct
tatagtgtttcatttattactaagtatcaatcaaaaggaagaaattcaaaggattatttg
atatttgtaactaataatcaacagctcgtcattgcacaattaaatgataataaagaatta
agtttagtatattcaaataatattgaagatcgtctaggaagaacagctttttatggaatt
agtggggttgttattagtaatagccatttattacttcatttatataatcatttaattaaa
ataatacctcttcccagagaagaagaaaatttaccagaagcaccattcaatttacgtata
gatgaacaaagggttgttgggttgtattgtcttcaattggaccaaaaacaagttattgga
attcaccatgaaataaagaatgatattaaagttattacattttatgaatttaatattgaa
tctaagacattaaatctttataataaacaaatagaagatacatcaaatattgatttattt
attccttatttgggaaatgaaggatatttcaaaataaattcacaaacagtaagttttgtt
cctaattcaaatcaaatatctagtgtttcaatgagaccaattcatcttgagacatattgt
tttcttgatgaaaaaaggttattattatcagataacaaaggtaaaatgcatttaataaca
ttaaaagaaaataataaacatgaaatagaattatattattatcctttagaatatcaagca
ttaactattccaagtactatattatatcttgataattcagtattattctgggggtctaaa
ggtggggattcacatttaatcaaaattaatgagaaaagatgtgaaatattagaaacattt
gaaaatcgaggaccaatattagatatgacagctatacatgatgaaataactaataaagat
gatttattaatgtgttgtaatacatatcaacaaggaactcttaaattaataagttcaggt
gtaggtattgatattatttgtcaaaatgaaatgaaaggaattacacatttatatcaagta
gaaatgggaaataaagaatatttaattattagttatagtgataatagtaaagtatttgaa
tctcaacaagaaaataatcaattacaatttaatgaaatagaaattaaaggatttaataga
aaagaagaaacaatttgtagtggaattattgaaattggagaaatgaaggaaatttgtttt
gttcaggtaactagagaagaggttaatatttttgattcagaacaacttaaacttattcaa
caaattagagtcaataaatttatttctcattcatgtatttatgatgaaaagttatatatc
agtcaatcaaatgaaattaatgtattaaatgagaaaaaagaaattaaacatatttattct
ggtgaaaatgatatttcagcatttactattggaaaagaaggaactgaagatgttattgga
atatgttattgggatagtaataaaatggaaataattaaattagagaatggaaataaaaat
catattagagaaattaatgggaatatttatggaaaatcaattgaaattattaataataaa
gaaggaatgtatattgtgattggaatgggagatggaagagtattagtatatcaaatggaa
gaattaatggaaatagaaggagaaataacaaagaattataaagtacttgatattggatta
tctggaattgaattaaaaacattagaaattaatggaatgaaatatattatgtgtttatgt
gatcgtccaacattagtttctatttataaaggaaaaataaaaacattatcagttaattgt
agtgaaattgtttcaattgttccatttaaaatgaaagaatgcatgaatagtctaattgtt
gcaacaaaagaaaatatcattattggtaatattgaagagattcaatcaattcatacaaaa
agtttatctattggagtatttataagtcgaatagttatttcaaaacaagaaaataaagca
ttattattgagtagtgaaattaaagaattaaaagagaaaagaattgaaagtcattctatt
aaattaattgattttagaaaaatggaaattgaagatagtcatgaattaaaagaaaatgaa
catgctttatctattgaagaaattgtagttgatgaaaaagaaatgtttgttattggaact
gcttttgcaaaaccaaatgaagtagaaccaagtagtggaagaattcttattgttcaaata
aaagatggaaaacttgaaattgtatttgagaaagatgttaatggagctgtttattcaata
aaaactctactcaaaaaatatttggctatgtctatagaaaagaaattagttatatttgaa
tatcaaagaattataacaaatggtgaatttgaagttaaattacaagagaaaggaagttgt
aatgtaaagttaattggattatatgttaaaactatgggaaataaaatacttgttggagat
cttatgaaaagtattagtgtttattcatttgataataatggaaataataaaaattgttta
aatgaagttagtagagatttctatgcatcttatacaactgcaattgaatttgttgatgaa
aattgttatcttagttctgatagtaattctaatttattagtattcaatacaaattctact
ggtaatgaatcagaaagatttagacttaataattgtgcacatattcatgttggagaatgc
attaatgtaatgtgtaaaggatccattgcaccaactcattcaacatatgaaaccatccag
aagaaatgtatattatttggaggagttactggatacattggtggaatatgtgaaattcca
aatgaaatatatgatatattgattaaagtacaaaatcaaattttactccaaatgaaaggc
attgttgaatgcacaacacctgatgaatggaaaaaagttattgatgattggaaacgaatg
ccttcaagtaatattattgatggaaatattgttgagagttatttggaaatgtctaaagaa
aaacaatgtgaaattgcacatttaagtggagttaatgaagaacaaataaatgatatcata
gaaaatatgattagtctattccattaa

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