KEGG   Entamoeba dispar: EDI_337480
Entry
EDI_337480        CDS       T01083                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
edi  Entamoeba dispar
Pathway
edi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:edi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EDI_337480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:edi03021]
    EDI_337480
Enzymes [BR:edi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EDI_337480
Transcription machinery [BR:edi03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     EDI_337480
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 5881343
NCBI-ProteinID: XP_001736348
UniProt: B0EDI6
LinkDB
AA seq 1568 aa
MSSVELRKTFQETPVEITSTGFDFYSADEIRHMSVKEITKGTSFDLLGNQELEGLYDPAL
GVFGKNTICPTCGLTEEGCPGHFGHFELEEPLYQPLLLPELVKLLRSICMKCHSLKASKQ
VILGAAIELERLSKNDIEGAMDIHGLVKEAQYIQRKANASRGKLKREQVEDEENLTVERE
VDKELERIFKKECGKGIKKDISFIHTDTHCKAVKNELIAHMVALKDKPCPYCKTVSPKIV
LNDSKTGFVFYGENTDAAKNRSEHKYETTPSYIMNILKEAWEHNDIQNEVLSRMYYSQMR
GGEKLDIIIPSYHIFFVEVLPIPPSRFRQLNKFGELISDHPQSIYYRTIIESSNTLKVRR
EGTRIDYSERFLIDQMQKAYNLLILTGNAEEGISMKSILEHKKGLFRNNMMGKRVNYAAR
TVISPDPFLPTNTIGMPLPFAMRLTIAVPVNERNYEEMKQAVINGPQVWPGALYIENEWG
HKIVLLDDSNPYNKTKRQGEAERLLVIDPKAPRSFKTVFRHVIDNDMVLSNRQPTLHKPG
IMGHYVKVLKIEKTIRMHYANCNTFNADFDGDEMNLHLPQSMEARSEVMNIALSDEQYVV
PKNGQPLRGLIQDHVISSFMLTKRDTFFNKEEYCQIIYTALYGIYEQYSIRIPKPAILKP
IPKWTGKQVITGILMHISTNHCTINFEGKCKISTNEINRGGYQTKKEIEMMKQKDEFTEK
WNGANDSLCIIKESQMLTGTLDKNQIGATNQSLIHAIYELYNGKVAGMCLTLLSRLLTTY
LQRIGHTCSLDDCMLKPEFDNKRTEMLNKTNELARIATAKHFKLEGHSKYDIDLALANAR
RRPQLSKELDDSVKNEVNECTSNVIKECIPYGQLRAFPWNSLALMTTTGAKGSKVNHSQI
TCLLGQQELEGRRVPVMATGKTLPSFPRYDTSARAGGFIASRFLTGVPPQEFFFHCMAGR
EGLIDTAVKTASSGYLQRCVIKMLESLHVEYDYSVRESDGSIIEFMYGDDGIDVMKSGFL
NNIDFWANNYDALVSKYETKTILSKFKKGFSRACKLQKKCLRHPEQYEPVQSIYSPSNNL
AAVSEKYYKLINDYIKEDKRGEFKSGKLDPETFKVMMMLKYNKSLINPGEPVGVLAGQSI
GEPSTQMTLNTFHLAGRGDVNVTLGMPRIKELVMFAKKEIATPSMILYLKEPNQKNTEKL
AKLLTKVTLANIIEGIKCLDSIIVHEGQRKRQYTIDLTLIDKYEEIVDFNTSDITKKVNS
VLMNEITKRQQNKVGIDIDYKGVSGEEAEEKVKEEDEDVQEKINKGKVIEEEVFEEEKNE
MSEEEEVEKEEKNSSSSEEEEEKEEKNLSEEKEEKKGKSKIIEKEEKVKKQHLIVSVLLN
VNDKVSMVSVVEKVIEKIVLYECPNIVRGIPLSKKKEGRTIYYVMTEGVNFRAVLQFGNL
VDVDSVETNDVYAVLNMYGVEAARTVLIHEIDSVFKAYGIDVDPRHLNLVADYMTYEGEY
KSLNRSGMDHNPSPFTKITFETSLGFLAKTCVSGQKDNLKSPSGSVVMGKNMVFGTGAFD
IYTELTDE
NT seq 4707 nt   +upstreamnt  +downstreamnt
atgtcatcagttgagctaagaaaaacttttcaagaaacaccagttgaaattacatcaact
ggatttgatttttattcagctgatgaaatacgacatatgagtgtaaaagaaattacaaaa
ggaacatcatttgatttattaggaaatcaagaattagaaggactgtatgatccagcactt
ggagtttttgggaaaaatactatatgtccaacatgtggacttactgaagaaggatgtcca
ggacattttggacattttgaacttgaagaaccattatatcaaccgttattattaccagaa
ttagtaaaattattaagatctatttgtatgaaatgtcattcattaaaagcatcaaaacaa
gtaatacttggagcagcaattgaacttgaacgattatcaaaaaatgatattgaaggagcg
atggatattcatggattagttaaagaagcacaatatatacaaaggaaagcaaatgcatca
agaggaaaattaaaaagagaacaagttgaagatgaagagaatttaacagttgaacgagaa
gtagataaagaattagaaagaatatttaaaaaagaatgtggaaaaggaattaagaaagat
ataagttttattcatacagatacacattgtaaagcagttaaaaatgaacttattgcacat
atggtagcattaaaagataaaccatgtccatattgtaaaacagtatcaccaaaaatagta
ttaaatgattcaaaaacaggatttgtattttatggagaaaatacagatgcagctaaaaat
cgaagtgaacataaatatgaaacaacgccatcatatataatgaatattcttaaagaagca
tgggaacataatgatatacaaaatgaagtattaagtagaatgtattatagtcaaatgaga
ggaggagaaaagttagatattattataccaagttatcatatattttttgtagaagttctt
ccaattccaccaagtagatttagacaattaaataaatttggagaattaattagtgatcat
ccacagagtatttattatagaacaattattgaatcaagtaatacattaaaagtaagaaga
gaaggaacaagaatagattattcagaaagatttttaatagatcaaatgcaaaaagcatat
aatttattaattcttacaggaaatgcagaagaaggaatatcaatgaaaagtattttagaa
cataaaaaaggattatttagaaataatatgatgggaaaaagagttaattatgcagcacgt
acagttatttcaccagatccatttcttccaacaaatacaattggaatgccacttccattt
gctatgagattaacaattgcagtaccagtaaatgaaagaaattatgaagaaatgaaacaa
gcagttattaatggaccacaagtatggccaggagcattatatattgaaaatgaatgggga
cataaaattgtattattagatgatagtaatccatataataaaacaaaaagacaaggagaa
gcagaaagattacttgttattgatccaaaagcaccaagaagttttaaaacagtatttaga
catgttattgataatgatatggtattatcaaatagacaaccaacattacataaaccagga
attatgggacattatgttaaagtattaaaaattgaaaaaacaattcgtatgcattatgct
aattgtaatacatttaatgcagattttgatggagatgaaatgaatttacatcttccacaa
agtatggaagcaagaagtgaagtaatgaatattgcattatcagatgagcaatatgttgtt
ccaaagaatggacaaccattaagaggacttattcaagatcatgttatttcatcatttatg
ttaacaaaaagagatacattctttaataaagaagaatattgtcaaattatttatacagca
ttatatggaatatatgaacaatattctattagaattccaaaaccagctattcttaaacca
ataccaaaatggacaggaaaacaagttataacaggaattttaatgcatattagtacaaat
cattgtacaattaattttgaaggaaaatgtaaaatatcaacaaatgaaattaatagagga
ggatatcaaacaaaaaaagaaatagaaatgatgaaacaaaaagatgaatttacagagaaa
tggaatggtgctaatgatagtttatgtattattaaagaatcacaaatgttaacaggaaca
ttagataaaaatcaaattggagcaacaaatcaaagtttaattcatgcaatttatgaatta
tataatggtaaagttgcaggaatgtgtcttacattattatcaagattattaacaacatat
ttacaaagaattggacatacatgttcattagatgattgtatgttaaaaccagaatttgat
aataaaagaacagaaatgttaaataaaacaaatgaattagcacgtattgctacagcaaaa
cattttaaattagaaggacattctaaatatgatattgatcttgcacttgctaatgctaga
agaagaccacaactttctaaagaacttgatgattcagttaaaaatgaagttaatgaatgt
acatcaaatgtaattaaagaatgtattccatatggacaattaagagcatttccatggaat
agtcttgcattaatgacaacaacaggagcaaaaggatcaaaagttaatcattcacaaatt
acatgtttacttggacaacaagaattagaaggaagaagagtaccagttatggcaacaggt
aaaacattaccatcatttccacgatatgatacatcagcaagagcaggaggatttattgca
tcaagattccttacaggagttccaccacaagaattctttttccattgtatggcaggaaga
gaaggattaattgatacagcagttaaaacagcaagttcaggatatcttcaaagatgtgta
attaaaatgttagaatcattacatgtagaatatgattattcagtaagagaatcagatgga
tcaattatagaatttatgtatggagatgatggaattgatgtaatgaaaagtggatttctt
aataatattgatttttgggcaaataattatgatgcattagtttcaaaatatgaaacaaaa
actattctttcaaaatttaaaaaaggattttcaagagcatgtaaattacaaaaaaaatgt
ttaagacatccagaacaatatgaaccagttcaaagtatttattcaccaagtaataatctt
gcagctgtaagtgaaaaatattataaattaattaatgattatattaaagaagataaaaga
ggagaatttaaaagtggtaaacttgatccagaaacatttaaagttatgatgatgttaaaa
tataataaatcattaattaatcctggagaacctgttggtgttttagcaggtcaatctatt
ggagaaccatcaacacaaatgacattaaatacattccatttagcaggaagaggagatgtt
aatgttacattaggtatgcctcgtattaaagagttagtaatgtttgctaaaaaagaaatt
gctacaccatcaatgattctttatttaaaagaaccaaatcaaaaaaatactgaaaaatta
gctaaattattaactaaagttacattagcaaatattattgaaggaattaaatgtttagat
tctattattgttcacgaaggacaaagaaaaagacaatatactattgatcttacacttatt
gataaatatgaagaaattgttgattttaatacttcagatattactaaaaaagttaattct
gttttaatgaatgaaattacaaaaagacaacaaaataaagttggtattgatattgattat
aaaggtgttagtggagaagaagctgaagaaaaagttaaagaagaagatgaagatgttcaa
gaaaaaattaataaaggtaaagttattgaagaagaagtatttgaagaagagaaaaatgaa
atgagtgaagaagaagaagtagaaaaagaagaaaagaattcatcatcatctgaagaagaa
gaagaaaaagaagaaaagaatttatcagaagaaaaagaagagaaaaaaggaaaatcaaaa
attatagaaaaagaagaaaaagtaaaaaaacaacatcttattgtgagtgtattacttaat
gttaatgataaagtatcaatggtatctgttgtagaaaaagtgattgaaaagattgtttta
tatgaatgtccaaatattgttagaggtattcctttaagtaaaaagaaagaaggacgtact
atatattatgttatgactgaaggagttaattttagagctgttcttcaatttggtaattta
gttgatgttgattcagttgaaacaaatgatgtttatgctgtcttaaatatgtatggtgtt
gaagctgcacgtactgttcttattcatgaaattgattctgtatttaaggcatatggtatt
gatgttgatccaagacatttgaatcttgttgcagattatatgacttatgaaggagaatat
aaatcattgaatagatctggtatggatcataatccatctccattcactaaaatcacattt
gaaacatcacttggattcttagctaaaacatgtgtttcaggtcaaaaagataatttaaaa
agtccatcaggatcagttgtaatgggtaaaaatatggtatttggaacaggtgcatttgat
atttacactgaattaactgatgaataa

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