Entamoeba dispar: EDI_344970
Help
Entry
EDI_344970 CDS
T01083
Name
(RefSeq) protein SOF1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
edi
Entamoeba dispar
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
edi03009
]
EDI_344970
04121 Ubiquitin system [BR:
edi04121
]
EDI_344970
Ribosome biogenesis [BR:
edi03009
]
Eukaryotic type
90S particles
Other 90S particles
EDI_344970
Ubiquitin system [BR:
edi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
EDI_344970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD_LRWD1
PHZA_PHZB
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
5878569
NCBI-ProteinID:
XP_001733684
UniProt:
B0E5K7
LinkDB
All DBs
AA seq
430 aa
AA seq
DB search
MFVWTRVQRSMKEEDHPFAQAREYKRALNATKLDKIFAKPFIGNLAGHPDGVTCITRTGN
EISYMASGGYDGEVRVWNVGTKQCLYNIQAHDTVCKGISVSTTKIPYIVTCSTDHTCKLW
PLSISTEEDSKPAKVNAPLMTYNHELPFSCIDTRRGTEDFCTGTSEGLDLWTFNRNEIVQ
HYDTETDGVLGCKISPTENNVVGITGGNRSIILIDLRANTPIKTVYGVRRYNDLSWNPQQ
VYMFTACSDDWNLYTYDIRKLNEARTIHKGHLGPVLTVDYSPTGREFTTGSYDKCIRIYN
EWCGYARDCYHTQRMQKVFNVCYSGDGHYIFSGSDEGNIRIWKAFASESTKIKDKREIAK
LNYLNGLKKKYKDMPEIRRIANHIHLPKELMHTKTIRDTMILSEKKKELNRMKHAKKQKK
TIKEKEENKN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtttggacacgtgttcaacgttcaatgaaagaagaagatcatccatttgcacaa
gcacgagaatataaacgagcattaaatgcaacaaaattagataaaatatttgctaaacca
tttatagggaatttagcaggacatccagatggagtaacatgtataactcgaacaggaaat
gaaatatcatatatggcaagtggaggatatgatggagaagtaagggtatggaatgttgga
acaaaacagtgtttgtataatattcaagcacatgatactgtttgtaaaggaattagtgtt
tctacaacaaaaataccatatattgttacatgttcaacagaccatacatgtaaattatgg
ccattatcaatttctacagaagaagatagtaaaccagcaaaagtaaatgcaccattaatg
acatataatcatgaattaccattttcatgtattgatacaagaagaggaacagaagatttt
tgtacaggaacaagtgaaggacttgatttatggacatttaatagaaatgaaattgtacaa
cattatgatacagaaacagatggagttttaggatgtaaaattagtccaacagaaaataat
gttgttggaataacaggaggaaatcgaagtattatattaattgatctacgagcaaataca
ccaattaaaacagtctatggagtaagaagatataatgatttatcatggaatccacaacaa
gtatatatgtttactgcatgtagtgatgattggaatctttatacttatgatataagaaaa
cttaatgaagcacgtacaattcataaaggacatcttggaccagtacttacagtagattat
tcacctacaggaagagaatttactacaggatcatatgataaatgtattagaatttataat
gaatggtgtggatatgcaagagattgttatcatacacaaagaatgcaaaaagtatttaat
gtttgttatagtggagatggacattatatatttagtggatcagatgaaggaaatattaga
atatggaaagcatttgcaagtgaatcaactaaaattaaagataaaagagaaattgctaaa
cttaattatcttaatggattaaaaaagaaatataaagatatgccagaaattcgaagaata
gcaaatcatattcatcttcctaaagaattaatgcatacaaaaacaattagagatacaatg
attcttagtgaaaagaagaaagaattaaatagaatgaaacatgctaaaaaacaaaaaaaa
acaataaaagagaaagaagaaaataaaaattga
DBGET
integrated database retrieval system
